RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 DDX4Q9NQI0 724 aaKnown RBP23.16■■□□□ 1.3
OTUB1-210ENST00000541478 USP25Q9UHP3 1055 aa23.16■■□□□ 1.3
OTUB1-210ENST00000541478 FAM237AA0A1B0GTK4 181 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 ZNF202O95125 648 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 NOVP48745 357 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 NLRP5P59047 1200 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 FAM177A1Q8N128 213 aaPredicted RBP23.15■■□□□ 1.3
OTUB1-210ENST00000541478 SYKP43405 635 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 RESP18Q5W5W9 173 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 TTLL6Q8N841 843 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 CEP95Q96GE4 821 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 HPSEQ9Y251 543 aa23.15■■□□□ 1.3
OTUB1-210ENST00000541478 PALM3A6NDB9 673 aaPredicted RBP23.14■■□□□ 1.29
OTUB1-210ENST00000541478 TRIM75PA6NK02 468 aa23.14■■□□□ 1.29
OTUB1-210ENST00000541478 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
OTUB1-210ENST00000541478 STAG2Q8N3U4 1231 aa23.14■■□□□ 1.29
OTUB1-210ENST00000541478 KCNQ5Q9NR82 932 aa23.14■■□□□ 1.29
OTUB1-210ENST00000541478 ANO10Q9NW15 660 aa23.14■■□□□ 1.29
OTUB1-210ENST00000541478 SERPINA10Q9UK55 444 aa23.14■■□□□ 1.29
OTUB1-210ENST00000541478 SOCS7O14512 581 aa23.13■■□□□ 1.29
OTUB1-210ENST00000541478 PPIP5K2O43314 1243 aa23.13■■□□□ 1.29
OTUB1-210ENST00000541478 PARP1P09874 1014 aaKnown RBP23.13■■□□□ 1.29
OTUB1-210ENST00000541478 ZNF165P49910 485 aa23.13■■□□□ 1.29
OTUB1-210ENST00000541478 ZRSR1Q15695 479 aaKnown RBP23.13■■□□□ 1.29
OTUB1-210ENST00000541478 SHC4Q6S5L8 630 aa23.13■■□□□ 1.29
OTUB1-210ENST00000541478 RTKN2Q8IZC4 609 aa23.13■■□□□ 1.29
OTUB1-210ENST00000541478 C21orf2O43822 256 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 PTPREP23469 700 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 ZNF579Q8NAF0 562 aaKnown RBP23.12■■□□□ 1.29
OTUB1-210ENST00000541478 CCDC148Q8NFR7 591 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 SPZ1Q9BXG8 430 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 EHD4Q9H223 541 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
OTUB1-210ENST00000541478 CBX8Q9HC52 389 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 PCDHB6Q9Y5E3 794 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 ADAMTSL1Q8N6G6 1762 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 SCN9AQ15858 1988 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 ESPNB1AK53 854 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 TRAPPC10P48553 1259 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 RBM5P52756 815 aaKnown RBP eCLIP23.12■■□□□ 1.29
OTUB1-210ENST00000541478 NPY5RQ15761 445 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 PPP4R3BQ5MIZ7 849 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 TNFRSF25Q93038 417 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 DNAJC25Q9H1X3 360 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 FAM13BQ9NYF5 915 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
OTUB1-210ENST00000541478 MYH8P13535 1937 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 SMARCA1P28370 1054 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 GALNT17Q6IS24 598 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 PIBF1Q8WXW3 757 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 MTMR4Q9NYA4 1195 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 KIAA1468Q9P260 1216 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 MTMR7Q9Y216 660 aa23.11■■□□□ 1.29
OTUB1-210ENST00000541478 ZNF646O15015 1829 aaPredicted RBP23.11■■□□□ 1.29
OTUB1-210ENST00000541478 KLRF2D3W0D1 207 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 NPM3O75607 178 aaKnown RBP23.1■■□□□ 1.29
OTUB1-210ENST00000541478 ADCY5O95622 1261 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 CLIC6Q96NY7 704 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 IDI2Q9BXS1 227 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 PDGFDQ9GZP0 370 aaPredicted RBP23.1■■□□□ 1.29
OTUB1-210ENST00000541478 FBXO2Q9UK22 296 aaPredicted RBP23.1■■□□□ 1.29
OTUB1-210ENST00000541478 SRPRBQ9Y5M8 271 aaKnown RBP23.1■■□□□ 1.29
OTUB1-210ENST00000541478 ATP2B1P20020 1258 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 LUZP1Q86V48 1076 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 PSMD1Q99460 953 aa23.1■■□□□ 1.29
OTUB1-210ENST00000541478 NAT10Q9H0A0 1025 aaKnown RBP23.1■■□□□ 1.29
OTUB1-210ENST00000541478 PLCB2Q00722 1185 aa23.09■■□□□ 1.29
OTUB1-210ENST00000541478 NFIAQ12857 509 aa23.09■■□□□ 1.29
OTUB1-210ENST00000541478 CCDC12Q8WUD4 166 aaPredicted RBP23.09■■□□□ 1.29
OTUB1-210ENST00000541478 CCDC17Q96LX7 622 aa23.09■■□□□ 1.29
OTUB1-210ENST00000541478 KCNH3Q9ULD8 1083 aa23.09■■□□□ 1.29
OTUB1-210ENST00000541478 PCDHA4Q9UN74 947 aa23.09■■□□□ 1.29
OTUB1-210ENST00000541478 IGKV6D-41A0A0C4DH26 115 aa23.08■■□□□ 1.29
OTUB1-210ENST00000541478 TTLL1O95922 423 aa23.08■■□□□ 1.29
OTUB1-210ENST00000541478 PTMAP06454 111 aaKnown RBP23.08■■□□□ 1.29
OTUB1-210ENST00000541478 AKR1B1P15121 316 aa23.08■■□□□ 1.29
OTUB1-210ENST00000541478 CEP57L1Q8IYX8 460 aa23.08■■□□□ 1.29
OTUB1-210ENST00000541478 BLIDQ8IZY5 108 aa23.08■■□□□ 1.29
OTUB1-210ENST00000541478 BARHL2Q9NY43 387 aa23.08■■□□□ 1.29
OTUB1-210ENST00000541478 CYTH3O43739 400 aa23.08■■□□□ 1.28
OTUB1-210ENST00000541478 SHMT1P34896 483 aa23.08■■□□□ 1.28
OTUB1-210ENST00000541478 TTC38Q5R3I4 469 aa23.08■■□□□ 1.28
OTUB1-210ENST00000541478 ZSCAN30Q86W11 494 aa23.08■■□□□ 1.28
OTUB1-210ENST00000541478 HOOK1Q9UJC3 728 aaKnown RBP23.08■■□□□ 1.28
OTUB1-210ENST00000541478 BAZ2BQ9UIF8 2168 aaKnown RBP23.07■■□□□ 1.28
OTUB1-210ENST00000541478 ASPRV1Q53RT3 343 aa23.07■■□□□ 1.28
OTUB1-210ENST00000541478 EARS2Q5JPH6 523 aaKnown RBP23.07■■□□□ 1.28
OTUB1-210ENST00000541478 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
OTUB1-210ENST00000541478 ELOA2Q8IYF1 753 aaPredicted RBP23.07■■□□□ 1.28
OTUB1-210ENST00000541478 DAGLBQ8NCG7 672 aa23.07■■□□□ 1.28
OTUB1-210ENST00000541478 GPKOWQ92917 476 aaPredicted RBP eCLIP23.07■■□□□ 1.28
OTUB1-210ENST00000541478 FERMT2Q96AC1 680 aa23.07■■□□□ 1.28
OTUB1-210ENST00000541478 RRP36Q96EU6 259 aaKnown RBP23.07■■□□□ 1.28
OTUB1-210ENST00000541478 PI4KBQ9UBF8 816 aa23.07■■□□□ 1.28
OTUB1-210ENST00000541478 SEC63Q9UGP8 760 aaKnown RBP23.07■■□□□ 1.28
OTUB1-210ENST00000541478 FAM205CA6NFA0 338 aa23.06■■□□□ 1.28
OTUB1-210ENST00000541478 GOLGA6L19H0YKK7 550 aa23.06■■□□□ 1.28
OTUB1-210ENST00000541478 GOLGA8HP0CJ92 632 aa23.06■■□□□ 1.28
OTUB1-210ENST00000541478 USP17L2Q6R6M4 530 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms