RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ISL2Q96A47 359 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 MKNK2Q9HBH9 465 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 LRRC4CQ9HCJ2 640 aa8.25□□□□□ -1.09
SUDS3-202ENST00000541280 HCLS1P14317 486 aaPredicted RBP8.24□□□□□ -1.09
SUDS3-202ENST00000541280 LRRC14Q15048 493 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 LLGL2Q6P1M3 1020 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 WFDC3Q8IUB2 231 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 AGBL5Q8NDL9 886 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 MISP3Q96FF7 219 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 C14orf93Q9H972 538 aaKnown RBP8.24□□□□□ -1.09
SUDS3-202ENST00000541280 CBX8Q9HC52 389 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 PAK6Q9NQU5 681 aaPredicted RBP8.24□□□□□ -1.09
SUDS3-202ENST00000541280 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
SUDS3-202ENST00000541280 DCCP43146 1447 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 SPATA31E1Q6ZUB1 1445 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
SUDS3-202ENST00000541280 USP17L7P0C7H9 530 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 RASIP1Q5U651 963 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 MPRIPQ6WCQ1 1025 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 BCL7CQ8WUZ0 217 aaPredicted RBP8.23□□□□□ -1.09
SUDS3-202ENST00000541280 DUSP23Q9BVJ7 150 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 ADGRF5Q8IZF2 1346 aa8.23□□□□□ -1.09
SUDS3-202ENST00000541280 ABCC11Q96J66 1382 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 SETBP1Q9Y6X0 1596 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 PTPRUQ92729 1446 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
SUDS3-202ENST00000541280 PRPF40AO75400 957 aaKnown RBP8.22□□□□□ -1.09
SUDS3-202ENST00000541280 FBXO24O75426 580 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 GNA15P30679 374 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 SV2BQ7L1I2 683 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 FLCNQ8NFG4 579 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 ACSBG1Q96GR2 724 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 NWD1Q149M9 1564 aa8.22□□□□□ -1.09
SUDS3-202ENST00000541280 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
SUDS3-202ENST00000541280 FANCGO15287 622 aa8.21□□□□□ -1.1
SUDS3-202ENST00000541280 CELA3AP09093 270 aa8.21□□□□□ -1.1
SUDS3-202ENST00000541280 FGD1P98174 961 aa8.21□□□□□ -1.1
SUDS3-202ENST00000541280 TP53INP2Q8IXH6 220 aa8.21□□□□□ -1.1
SUDS3-202ENST00000541280 NETO1Q8TDF5 533 aa8.21□□□□□ -1.1
SUDS3-202ENST00000541280 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
SUDS3-202ENST00000541280 SLC5A6Q9Y289 635 aa8.21□□□□□ -1.1
SUDS3-202ENST00000541280 LRPPRCP42704 1394 aaKnown RBP8.21□□□□□ -1.1
SUDS3-202ENST00000541280 PTCH1Q13635 1447 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 PRAG1Q86YV5 1406 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 NEXMIFQ5QGS0 1516 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 LEFTY1O75610 366 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 BRINP3Q76B58 766 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 SND1Q7KZF4 910 aaKnown RBP eCLIP8.2□□□□□ -1.1
SUDS3-202ENST00000541280 FAM214BQ7L5A3 538 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
SUDS3-202ENST00000541280 U3KQE9 123 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 SPATA31A6Q5VVP1 1343 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 JCADQ9P266 1359 aa8.2□□□□□ -1.1
SUDS3-202ENST00000541280 CFAP65Q6ZU64 1925 aaKnown RBP8.19□□□□□ -1.1
SUDS3-202ENST00000541280 CLTCL1P53675 1640 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 OXCT1P55809 520 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 PPM1JQ5JR12 505 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 ZBTB37Q5TC79 503 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 PLD6Q8N2A8 252 aaKnown RBP8.19□□□□□ -1.1
SUDS3-202ENST00000541280 STK26Q9P289 416 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 ROBO2Q9HCK4 1378 aa8.19□□□□□ -1.1
SUDS3-202ENST00000541280 SPHKAPQ2M3C7 1700 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 ITGB5P18084 799 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 EIF4BP23588 611 aaKnown RBP8.18□□□□□ -1.1
SUDS3-202ENST00000541280 TXKP42681 527 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
SUDS3-202ENST00000541280 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 FAM181AQ8N9Y4 354 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 KCT2Q8NC54 265 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 GAL3ST3Q96A11 431 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 TNKS2Q9H2K2 1166 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 SSU72Q9NP77 194 aaKnown RBP8.18□□□□□ -1.1
SUDS3-202ENST00000541280 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 PCDHA4Q9UN74 947 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 AK5Q9Y6K8 562 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 PIK3C2GO75747 1445 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 ADGRL3Q9HAR2 1447 aa8.18□□□□□ -1.1
SUDS3-202ENST00000541280 DCDC2CA8MYV0 355 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 CEACAM5P06731 702 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 RPS26P62854 115 aaKnown RBP8.17□□□□□ -1.1
SUDS3-202ENST00000541280 PRKCQQ04759 706 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
SUDS3-202ENST00000541280 CYFIP1Q7L576 1253 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 SPRED2Q7Z698 418 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 GOLGA2P5Q9HBQ8 144 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 POGKQ9P215 609 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 TECPR2O15040 1411 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
SUDS3-202ENST00000541280 ANKRD33BA6NCL7 494 aa8.16□□□□□ -1.1
SUDS3-202ENST00000541280 IGF2BP3O00425 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
SUDS3-202ENST00000541280 MYOM2P54296 1465 aa8.16□□□□□ -1.1
SUDS3-202ENST00000541280 WAPLQ7Z5K2 1190 aa8.16□□□□□ -1.1
SUDS3-202ENST00000541280 UBE3DQ7Z6J8 389 aa8.16□□□□□ -1.1
SUDS3-202ENST00000541280 C12orf40Q86WS4 652 aa8.16□□□□□ -1.1
SUDS3-202ENST00000541280 HEXIM2Q96MH2 286 aaKnown RBP8.16□□□□□ -1.1
SUDS3-202ENST00000541280 PRDM10Q9NQV6 1147 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms