RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ARMC5Q96C12 935 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
LTBR-208ENST00000541005 NYAP2Q9P242 653 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 SRRDQ9UH36 339 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 SYNPO2Q9UMS6 1093 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 RAD50Q92878 1312 aa15.59■□□□□ 0.09
LTBR-208ENST00000541005 ORC4O43929 436 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 PRDM1O75626 825 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 HOXD10P28358 340 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 KIAA1755Q5JYT7 1200 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 POTEEQ6S8J3 1075 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
LTBR-208ENST00000541005 STK11IPQ8N1F8 1099 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 NEDD1Q8NHV4 660 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 TXNRD2Q9NNW7 524 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 PTCH2Q9Y6C5 1203 aa15.58■□□□□ 0.08
LTBR-208ENST00000541005 CCDC85CA6NKD9 419 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 WDR46O15213 610 aaKnown RBP15.57■□□□□ 0.08
LTBR-208ENST00000541005 CAPN15O75808 1086 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 FMNL1O95466 1100 aaPredicted RBP15.57■□□□□ 0.08
LTBR-208ENST00000541005 CEP95Q96GE4 821 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 DSCC1Q9BVC3 393 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 MTMR4Q9NYA4 1195 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 RBPJLQ9UBG7 517 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 MYPNQ86TC9 1320 aa15.57■□□□□ 0.08
LTBR-208ENST00000541005 PDE4DIPQ5VU43 2346 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 SPDYE16A6NNV3 312 aaPredicted RBP15.56■□□□□ 0.08
LTBR-208ENST00000541005 PCP11498 1178 aaKnown RBP15.56■□□□□ 0.08
LTBR-208ENST00000541005 ERVK-9P63128 1117 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 ERVK-24P63145 666 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 CTDSPL2Q05D32 466 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 GPRC5AQ8NFJ5 357 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 MKL1Q969V6 931 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 NBPF3Q9H094 633 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 RABGAP1Q9Y3P9 1069 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 TACC3Q9Y6A5 838 aa15.56■□□□□ 0.08
LTBR-208ENST00000541005 PLXNA1Q9UIW2 1896 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 TNPO2O14787 897 aaKnown RBP15.55■□□□□ 0.08
LTBR-208ENST00000541005 CNMDO75829 334 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 TTLL1O95922 423 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 TSPY3P0CV98 308 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 TSPY8P0CW00 308 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 CHMLP26374 656 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 PRKCZQ05513 592 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 COG2Q14746 738 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 TANGO6Q9C0B7 1094 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 IL25Q9H293 177 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 CENPFP49454 3210 aa15.55■□□□□ 0.08
LTBR-208ENST00000541005 NEFLP07196 543 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 NOVP48745 357 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 NT5C2P49902 561 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 TFAP4Q01664 338 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 IRF5Q13568 498 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 SLC9C1Q4G0N8 1177 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 SPICE1Q8N0Z3 855 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 MB21D1Q8N884 522 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 GMCL1P1Q8NEA9 526 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 STAG1Q8WVM7 1258 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 RUFY2Q8WXA3 655 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 COA7Q96BR5 231 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 ZNF333Q96JL9 665 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 HOXC10Q9NYD6 342 aa15.54■□□□□ 0.08
LTBR-208ENST00000541005 NDUFB10O96000 172 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 MAPK4P31152 587 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 AKNAD1Q5T1N1 836 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 CCDC136Q96JN2 1154 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 INCENPQ9NQS7 918 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 GABRQQ9UN88 632 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 ADAMTS5Q9UNA0 930 aa15.53■□□□□ 0.08
LTBR-208ENST00000541005 TSPY2A6NKD2 308 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 F5H6K3 240 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 PEX10O60683 326 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 FLOT1O75955 427 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 ECM2O94769 699 aaPredicted RBP15.52■□□□□ 0.08
LTBR-208ENST00000541005 CENPBP07199 599 aaPredicted RBP15.52■□□□□ 0.08
LTBR-208ENST00000541005 DSG3P32926 999 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 FLT3LGP49771 235 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 RGS19P49795 217 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 HAND2P61296 217 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 CCNA1P78396 465 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 KLRC3Q07444 240 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 Q3C1V9 767 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 BMP2KLQ5H9B9 411 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 NBPF11Q86T75 865 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 SLAIN1Q8ND83 568 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 RAET1EQ8TD07 263 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 RNF41Q9H4P4 317 aaPredicted RBP15.52■□□□□ 0.08
LTBR-208ENST00000541005 IL17RBQ9NRM6 502 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 TCP11L1Q9NUJ3 509 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 BTBD7Q9P203 1132 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 CLIP2Q9UDT6 1046 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 CTNNA3Q9UI47 895 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 GJD2Q9UKL4 321 aa15.52■□□□□ 0.08
LTBR-208ENST00000541005 MYH6P13533 1939 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms