RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ZSWIM8A7E2V4 1837 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 SLC15A5A6NIM6 579 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 PATL2C9JE40 543 aaKnown RBP12.4□□□□□ -0.42
CDCA3-208ENST00000540683 MFAP1P55081 439 aaKnown RBP12.4□□□□□ -0.42
CDCA3-208ENST00000540683 ANKRD45Q5TZF3 282 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 SHCBP1Q8NEM2 672 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 APBA2Q99767 749 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 PUS7LQ9H0K6 701 aaKnown RBP12.4□□□□□ -0.42
CDCA3-208ENST00000540683 MROH8Q9H579 483 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 VCPKMTQ9H867 229 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 RBPJLQ9UBG7 517 aa12.4□□□□□ -0.42
CDCA3-208ENST00000540683 GPAA1O43292 621 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 MSCO60682 206 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-208ENST00000540683 SLC25A27O95847 323 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 ELNP15502 786 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 JAG1P78504 1218 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 MTFR1Q15390 333 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 WDR78Q5VTH9 848 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 MFSD14CQ5VZR4 134 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 GPR142Q7Z601 462 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
CDCA3-208ENST00000540683 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDCA3-208ENST00000540683 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-208ENST00000540683 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 ROBO3Q96MS0 1386 aa12.39□□□□□ -0.43
CDCA3-208ENST00000540683 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
CDCA3-208ENST00000540683 PRKAB2O43741 272 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 FLOT1O75955 427 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 NT5C2P49902 561 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 MAP2K5Q13163 448 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 ABRAQ8N0Z2 381 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 ACER1Q8TDN7 264 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 DPF3Q92784 378 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 NAPBQ9H115 298 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 UNC93B1Q9H1C4 597 aa12.38□□□□□ -0.43
CDCA3-208ENST00000540683 CTDP1Q9Y5B0 961 aaPredicted RBP12.38□□□□□ -0.43
CDCA3-208ENST00000540683 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-208ENST00000540683 GSG1L2A8MUP6 293 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 MINDY4BA8MYZ0 360 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 FDX1P10109 184 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 CYP2B6P20813 491 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 MORN1Q5T089 497 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 NECAB2Q7Z6G3 386 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 DYNLL2Q96FJ2 89 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 TXNRD2Q9NNW7 524 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 NYAP2Q9P242 653 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
CDCA3-208ENST00000540683 HOXC6P09630 235 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 CYP2D6P10635 497 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
CDCA3-208ENST00000540683 EEF2P13639 858 aaKnown RBP12.36□□□□□ -0.43
CDCA3-208ENST00000540683 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
CDCA3-208ENST00000540683 AKR1B1P15121 316 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 PTPREP23469 700 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 DPP9Q86TI2 863 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 PI4K2BQ8TCG2 481 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 SPATC1LQ9H0A9 340 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
CDCA3-208ENST00000540683 HIP1O00291 1037 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 RAD21O60216 631 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 EVI5O60447 810 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 TTLL1O95922 423 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 FCER1AP12319 257 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 DSG3P32926 999 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 GRB14Q14449 540 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 PLS1Q14651 629 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-208ENST00000540683 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 IFNL3Q8IZI9 196 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 USP6NLQ92738 828 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 NBPF3Q9H094 633 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 PORCNQ9H237 461 aa12.35□□□□□ -0.43
CDCA3-208ENST00000540683 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 RASA1P20936 1047 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 PDE1AP54750 535 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 Q3C1V9 767 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 MAP3K21Q5TCX8 1036 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 OLFML2BQ68BL8 750 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 PRPF38AQ8NAV1 312 aaKnown RBP12.34□□□□□ -0.43
CDCA3-208ENST00000540683 TRIB2Q92519 343 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 NRBP1Q9UHY1 535 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 BRCA2P51587 3418 aa12.34□□□□□ -0.43
CDCA3-208ENST00000540683 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 ZNF236Q9UL36 1845 aa12.33□□□□□ -0.44
CDCA3-208ENST00000540683 CYP2D7A0A087X1C5 515 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms