RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
PHC1-208ENST00000540574 GDAQ9Y2T3 454 aa11.17□□□□□ -0.62
PHC1-208ENST00000540574 CAMTA2O94983 1202 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 PDE4DQ08499 809 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
PHC1-208ENST00000540574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.62
PHC1-208ENST00000540574 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 ARHGAP6O43182 974 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 E4F1Q66K89 784 aaPredicted RBP11.16□□□□□ -0.62
PHC1-208ENST00000540574 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 CALML4Q96GE6 196 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 SRRTQ9BXP5 876 aaKnown RBP11.16□□□□□ -0.62
PHC1-208ENST00000540574 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 ZNF287Q9HBT7 754 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 NALCNQ8IZF0 1738 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 PSMA7O14818 248 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 PTPREP23469 700 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 CALML3P27482 149 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 CTR9Q6PD62 1173 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 SARM1Q6SZW1 724 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 CLEC10AQ8IUN9 316 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 BLIDQ8IZY5 108 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 PLA2G12BQ9BX93 195 aa11.16□□□□□ -0.62
PHC1-208ENST00000540574 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
PHC1-208ENST00000540574 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
PHC1-208ENST00000540574 TRIM49BA6NDI0 452 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 TOM1O60784 492 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 ZNF76P36508 570 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 RBL2Q08999 1139 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 PAK1Q13153 545 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 TCERG1LQ5VWI1 586 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 INTS5Q6P9B9 1019 aaKnown RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 FBXO38Q6PIJ6 1188 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 TOGARAM2Q6ZUX3 1019 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 RASGRP2Q7LDG7 609 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 ACRBPQ8NEB7 543 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 IL17RAQ96F46 866 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 EYA3Q99504 573 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 CUL4BQ13620 913 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 EARS2Q5JPH6 523 aaKnown RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 MSL1Q68DK7 614 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.15□□□□□ -0.62
PHC1-208ENST00000540574 DCP1AQ9NPI6 582 aaPredicted RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 USP21Q9UK80 565 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 RGPD1P0DJD0 1748 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 SMCO2A6NFE2 343 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 BMS1Q14692 1282 aaKnown RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 PTPROQ16827 1216 aa11.15□□□□□ -0.62
PHC1-208ENST00000540574 SRBD1Q8N5C6 995 aaKnown RBP11.15□□□□□ -0.62
PHC1-208ENST00000540574 ENC1O14682 589 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 BTDP43251 543 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 TOB1P50616 345 aaPredicted RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 RNASE9P60153 205 aaKnown RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 TBC1D8BQ0IIM8 1120 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 WWC2Q6AWC2 1192 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 CSGALNACT2Q8N6G5 542 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 POLD4Q9HCU8 107 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 ST7Q9NRC1 585 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 AKR1B10O60218 316 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 BMP15O95972 392 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 CDC25BP30305 580 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 CCDC40Q4G0X9 1142 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 COA7Q96BR5 231 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 RRP36Q96EU6 259 aaKnown RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 PAGE5Q96GU1 130 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 CENPHQ9H3R5 247 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 LUC7L2Q9Y383 392 aaKnown RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 SRPRBQ9Y5M8 271 aaKnown RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 NTSR2O95665 410 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 SLC16A2P36021 539 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 ST5P78524 1137 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 NFIXQ14938 502 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 NTRK3Q16288 839 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 VSTM4Q8IW00 320 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 ARFGAP3Q9NP61 516 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 BSDC1Q9NW68 430 aaPredicted RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 TOPAZ1Q8N9V7 1692 aa11.14□□□□□ -0.63
PHC1-208ENST00000540574 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
PHC1-208ENST00000540574 IKBKBO14920 756 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 CACNB3P54284 484 aa11.13□□□□□ -0.63
PHC1-208ENST00000540574 SPA17Q15506 151 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms