RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 CCDC34Q96HJ3 373 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 CHAMP1Q96JM3 812 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 PDLIM2Q96JY6 352 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 USP40Q9NVE5 1235 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 MTMR4Q9NYA4 1195 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 PIM2Q9P1W9 311 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 PI4KBQ9UBF8 816 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 HDAC9Q9UKV0 1011 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 CD2APQ9Y5K6 639 aa9.56□□□□□ -0.88
C2CD3-215ENST00000540452 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 PPIP5K2O43314 1243 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 TTLL1O95922 423 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 LIG1P18858 919 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 KCNA3P22001 575 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 CHRNA5P30532 468 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 GUCY1B3Q02153 619 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 AOC3Q16853 763 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 TATDN1Q6P1N9 297 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
C2CD3-215ENST00000540452 SLC51AQ86UW1 340 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 CCAR1Q8IX12 1150 aaKnown RBP9.55□□□□□ -0.88
C2CD3-215ENST00000540452 CCDC144CPQ8IYA2 1237 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 FMR1NBQ8N0W7 255 aaPredicted RBP9.55□□□□□ -0.88
C2CD3-215ENST00000540452 SRBD1Q8N5C6 995 aaKnown RBP9.55□□□□□ -0.88
C2CD3-215ENST00000540452 TNFRSF25Q93038 417 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 MKL1Q969V6 931 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 FERMT2Q96AC1 680 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 GMLQ99445 158 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 TMEM47Q9BQJ4 181 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 GLT8D2Q9H1C3 349 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 DBNDD1Q9H9R9 158 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 TMOD2Q9NZR1 351 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 USP25Q9UHP3 1055 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 MAD2L2Q9UI95 211 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 HERC5Q9UII4 1024 aaKnown RBP9.55□□□□□ -0.88
C2CD3-215ENST00000540452 HOOK1Q9UJC3 728 aaKnown RBP9.55□□□□□ -0.88
C2CD3-215ENST00000540452 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 ADAMTSL1Q8N6G6 1762 aa9.55□□□□□ -0.88
C2CD3-215ENST00000540452 LAD1O00515 517 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 NR1I2O75469 434 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 PARP1P09874 1014 aaKnown RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 PTPREP23469 700 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 RPS12P25398 132 aaKnown RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 AXDND1Q5T1B0 1012 aaPredicted RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 ARL6IP4Q66PJ3 421 aaKnown RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 MCTP2Q6DN12 878 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 KANK3Q6NY19 840 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 OGFOD1Q8N543 542 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 KRI1Q8N9T8 703 aaKnown RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 DYNLL2Q96FJ2 89 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 AIFM3Q96NN9 605 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 RIOX1Q9H6W3 641 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 GINM1Q9NU53 330 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 BARHL2Q9NY43 387 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 NYAP2Q9P242 653 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 PCDH10Q9P2E7 1040 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 HPSEQ9Y251 543 aa9.54□□□□□ -0.88
C2CD3-215ENST00000540452 SRPRBQ9Y5M8 271 aaKnown RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 V9GY48 417 aaPredicted RBP9.54□□□□□ -0.88
C2CD3-215ENST00000540452 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 BTBD18B2RXH4 712 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 SMIM22K7EJ46 135 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 PLEKHA8P1O95397 391 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 GNA11P29992 359 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 GUCY1A2P33402 732 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 SHMT1P34896 483 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 TRAF1Q13077 416 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 RESP18Q5W5W9 173 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 OTUD7BQ6GQQ9 843 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 SASS6Q6UVJ0 657 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 OLFM4Q6UX06 510 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 TMEM179Q6ZVK1 233 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 FAM83AQ86UY5 434 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 RAB11FIP4Q86YS3 637 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 FSIP1Q8NA03 581 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 FAM200AQ8TCP9 573 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 CEP95Q96GE4 821 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 ZMYND12Q9H0C1 365 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 RBSNQ9H1K0 784 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 DDX4Q9NQI0 724 aaKnown RBP9.53□□□□□ -0.88
C2CD3-215ENST00000540452 SAP30BPQ9UHR5 308 aaKnown RBP9.53□□□□□ -0.88
C2CD3-215ENST00000540452 ZNRF3Q9ULT6 936 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
C2CD3-215ENST00000540452 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 YDJCA8MPS7 323 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 KLRF2D3W0D1 207 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 C21orf2O43822 256 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 TBC1D12O60347 775 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 NMT2O60551 498 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 DPEP1P16444 411 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 NLRP5P59047 1200 aa9.52□□□□□ -0.89
C2CD3-215ENST00000540452 TYRO3Q06418 890 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms