RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 AKNAD1Q5T1N1 836 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 SIAH1Q8IUQ4 282 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 FAM43AQ8N2R8 423 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 NKX2-3Q8TAU0 364 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 ACER1Q8TDN7 264 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 RNF41Q9H4P4 317 aaPredicted RBP8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 INCENPQ9NQS7 918 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 SAGE1Q9NXZ1 904 aa8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 RBM8AQ9Y5S9 174 aaKnown RBP8.27□□□□□ -1.09
LPCAT3-209ENST00000540060 A0A1W2PRG0 241 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TSPY2A6NKD2 308 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 C19orf81C9J6K1 198 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 BTBD19C9JJ37 291 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 USP17L10C9JJH3 530 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 CA12O43570 354 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 ALDH1A1P00352 501 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TSPY3P0CV98 308 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TSPY8P0CW00 308 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TFAP4Q01664 338 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 FAM47AQ5JRC9 791 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TREML2Q5T2D2 321 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 GPAT2Q6NUI2 795 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 GADL1Q6ZQY3 521 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 MFSD6Q6ZSS7 791 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 KIAA1211Q6ZU35 1233 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 ANKRD23Q86SG2 305 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 NEDD1Q8NHV4 660 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 CEP95Q96GE4 821 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 C12orf42Q96LP6 360 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 IRX2Q9BZI1 471 aaPredicted RBP8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 KANSL2Q9H9L4 492 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 ZCCHC17Q9NP64 241 aaKnown RBP8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 RNF186Q9NXI6 227 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 AGTPBP1Q9UPW5 1226 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TMX2Q9Y320 296 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 TAF6LQ9Y6J9 622 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 ADGRA2Q96PE1 1338 aa8.26□□□□□ -1.09
LPCAT3-209ENST00000540060 RBBP6Q7Z6E9 1792 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 CASP8AP2Q9UKL3 1982 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 FOXN1O15353 648 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 RANBP6O60518 1105 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 NMT2O60551 498 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 TRPA1O75762 1119 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 EEF2P13639 858 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 NOVP48745 357 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 NT5C2P49902 561 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 USP14P54578 494 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 NECTIN1Q15223 517 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 ZYXQ15942 572 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 RRP12Q5JTH9 1297 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 OTUD7BQ6GQQ9 843 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 USP17L2Q6R6M4 530 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 STOX1Q6ZVD7 989 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 FASTKD5Q7L8L6 764 aaKnown RBP8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 FEZ1Q99689 392 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 SH2D4AQ9H788 454 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 CNNM2Q9H8M5 875 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 IL17RBQ9NRM6 502 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 TOMM22Q9NS69 142 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 EMILIN3Q9NT22 766 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 MTMR4Q9NYA4 1195 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 SLC45A1Q9Y2W3 748 aa8.25□□□□□ -1.09
LPCAT3-209ENST00000540060 PLXNB2O15031 1838 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 B4E1Z4 1266 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 E7EWF7 191 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 PDHXO00330 501 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 SLC27A2O14975 620 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 KDM4AO75164 1064 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 REC8O95072 547 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 TTLL1O95922 423 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 HSPA8P11142 646 aaKnown RBP8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 VCAM1P19320 739 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 CRHR2Q13324 411 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 TAF1CQ15572 869 aaPredicted RBP8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 KIAA1755Q5JYT7 1200 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 CREB3L3Q68CJ9 461 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 ESR2Q92731 530 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 KRT23Q9C075 422 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 VCPKMTQ9H867 229 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 TCP11L1Q9NUJ3 509 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 TMOD4Q9NZQ9 345 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 TSKSQ9UJT2 592 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 SYNPO2Q9UMS6 1093 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 MYH6P13533 1939 aa8.24□□□□□ -1.09
LPCAT3-209ENST00000540060 EPB41L2O43491 1005 aaKnown RBP8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 TBC1D8O95759 1140 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 CYP2C8P10632 490 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 HOXA7P31268 230 aaPredicted RBP8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 ATP2B2Q01814 1243 aa8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 NOM1Q5C9Z4 860 aaKnown RBP8.23□□□□□ -1.09
LPCAT3-209ENST00000540060 PPP4R3BQ5MIZ7 849 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms