RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 WISP1O95388 367 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 HABP4Q5JVS0 413 aaKnown RBP5.47□□□□□ -1.53
C2CD3-214ENST00000540057 CST9Q5W186 159 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 PRR23CQ6ZRP0 262 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.47□□□□□ -1.53
C2CD3-214ENST00000540057 PNMA8AQ86V59 439 aaPredicted RBP5.47□□□□□ -1.53
C2CD3-214ENST00000540057 CACTIN-AS1Q8N1I8 211 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 HELQQ8TDG4 1101 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 GCC1Q96CN9 775 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 CCDC97Q96F63 343 aaPredicted RBP5.47□□□□□ -1.53
C2CD3-214ENST00000540057 RASSF4Q9H2L5 321 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 GGNBP2Q9H3C7 697 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 ABI2Q9NYB9 513 aaPredicted RBP5.47□□□□□ -1.53
C2CD3-214ENST00000540057 TMEM63CQ9P1W3 806 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 SERPINA10Q9UK55 444 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 RNF123Q5XPI4 1314 aa5.47□□□□□ -1.53
C2CD3-214ENST00000540057 LINC01387J3KSC0 135 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 TRAF5O00463 557 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 PDE12Q6L8Q7 609 aaKnown RBP5.46□□□□□ -1.54
C2CD3-214ENST00000540057 TXNDC11Q6PKC3 985 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 AGGF1Q8N302 714 aaeCLIP5.46□□□□□ -1.54
C2CD3-214ENST00000540057 CEP120Q8N960 986 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 PUS7Q96PZ0 661 aaKnown RBP5.46□□□□□ -1.54
C2CD3-214ENST00000540057 LACRTQ9GZZ8 138 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 KCNK4Q9NYG8 393 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 NARFQ9UHQ1 456 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 FNDC3AQ9Y2H6 1198 aaKnown RBP5.46□□□□□ -1.54
C2CD3-214ENST00000540057 PPME1Q9Y570 386 aa5.46□□□□□ -1.54
C2CD3-214ENST00000540057 SOS1Q07889 1333 aaPredicted RBP5.46□□□□□ -1.54
C2CD3-214ENST00000540057 ARFGEF2Q9Y6D5 1785 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 HYAL3O43820 417 aaPredicted RBP5.45□□□□□ -1.54
C2CD3-214ENST00000540057 ACPPP15309 386 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 EPHA1P21709 976 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 CABP4P57796 275 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 TTC39BQ5VTQ0 682 aaPredicted RBP5.45□□□□□ -1.54
C2CD3-214ENST00000540057 CEP135Q66GS9 1140 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 CIAPIN1Q6FI81 312 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 SAPCD2Q86UD0 394 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 PSMG3-AS1Q96PY0 264 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 BRIP1Q9BX63 1249 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 PBX4Q9BYU1 374 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 MUC3BQ9H195 1237 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 ELP3Q9H9T3 547 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 CNTN3Q9P232 1028 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 KANSL3Q9P2N6 904 aa5.45□□□□□ -1.54
C2CD3-214ENST00000540057 FZD9O00144 591 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 SMNDC1O75940 238 aaKnown RBP eCLIP5.44□□□□□ -1.54
C2CD3-214ENST00000540057 CDC27P30260 824 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 PDE6BP35913 854 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 FXR1P51114 621 aaKnown RBP eCLIP5.44□□□□□ -1.54
C2CD3-214ENST00000540057 SOGA3Q5TF21 947 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 PRPF40BQ6NWY9 871 aaKnown RBP5.44□□□□□ -1.54
C2CD3-214ENST00000540057 DNAJC10Q8IXB1 793 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 EDEM1Q92611 657 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 UBL7Q96S82 380 aaPredicted RBP5.44□□□□□ -1.54
C2CD3-214ENST00000540057 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 ZNF277Q9NRM2 450 aaPredicted RBP5.44□□□□□ -1.54
C2CD3-214ENST00000540057 SALL4Q9UJQ4 1053 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 RNF112Q9ULX5 631 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 KIF20BQ96Q89 1820 aa5.44□□□□□ -1.54
C2CD3-214ENST00000540057 COL15A1P39059 1388 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 ANKRD26Q9UPS8 1709 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 A6NHS1 94 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 ADAM11O75078 769 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 PDGFAP04085 211 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 HSP90AB1P08238 724 aaKnown RBP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 SRGNP10124 158 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 CYP19A1P11511 503 aaPredicted RBP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 FSTP19883 344 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 CD68P34810 354 aaPredicted RBP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 FKBP4Q02790 459 aaKnown RBP eCLIP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 TBC1D9BQ66K14 1250 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 STYK1Q6J9G0 422 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 PRR5LQ6MZQ0 368 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 XKR5Q6UX68 686 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 ZNF438Q7Z4V0 828 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 GPC2Q8N158 579 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 CCDC82Q8N4S0 544 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 C1orf127Q8N9H9 656 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 FOXD4L4Q8WXT5 416 aaPredicted RBP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 HHIPL1Q96JK4 782 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 SPACA7Q96KW9 195 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 POP1Q99575 1024 aaKnown RBP5.43□□□□□ -1.54
C2CD3-214ENST00000540057 ADAM19Q9H013 955 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 CHRDQ9H2X0 955 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 ZBTB1Q9Y2K1 713 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 WASHC2AQ641Q2 1341 aa5.43□□□□□ -1.54
C2CD3-214ENST00000540057 FSCN2O14926 492 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 PPM1GO15355 546 aaPredicted RBP5.42□□□□□ -1.54
C2CD3-214ENST00000540057 CELF2O95319 508 aaKnown RBP5.42□□□□□ -1.54
C2CD3-214ENST00000540057 GLB1P16278 677 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 MPSTP25325 297 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 CDC25BP30305 580 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 EPS15P42566 896 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 CCDC93Q567U6 631 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 KIAA1211Q6ZU35 1233 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 ACAD11Q709F0 780 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 ARMC10Q8N2F6 343 aa5.42□□□□□ -1.54
C2CD3-214ENST00000540057 MASTLQ96GX5 879 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms