RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RBPJLQ9UBG7 517 aa21.75■■□□□ 1.07
SNRPA1-203ENST00000540017 CENPFP49454 3210 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 CCDC85CA6NKD9 419 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 TFAP4Q01664 338 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 ARHGEF6Q15052 776 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 NEDD1Q8NHV4 660 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 NYAP2Q9P242 653 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 MORF4L1Q9UBU8 362 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 PTCH2Q9Y6C5 1203 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 PLIN4Q96Q06 1357 aa21.74■■□□□ 1.07
SNRPA1-203ENST00000540017 MGAMO43451 1857 aa21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 FMNL1O95466 1100 aaPredicted RBP21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 FGRP09769 529 aa21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 NKX2-3Q8TAU0 364 aa21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 CEP95Q96GE4 821 aa21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 SH2D4AQ9H788 454 aa21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 MTMR4Q9NYA4 1195 aa21.73■■□□□ 1.07
SNRPA1-203ENST00000540017 CNMDO75829 334 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 TSPY3P0CV98 308 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 TSPY8P0CW00 308 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 Q3C1V9 767 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 TBC1D10CQ8IV04 446 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 LPAR1Q92633 364 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 DSCC1Q9BVC3 393 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 CLIP2Q9UDT6 1046 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 SRRDQ9UH36 339 aa21.72■■□□□ 1.07
SNRPA1-203ENST00000540017 RLFQ13129 1914 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 SPDYE16A6NNV3 312 aaPredicted RBP21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 ORC4O43929 436 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 GNRH1P01148 92 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 FCGRTP55899 365 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 PAGR1Q9BTK6 254 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 IL17RBQ9NRM6 502 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 GABRQQ9UN88 632 aa21.71■■□□□ 1.07
SNRPA1-203ENST00000540017 NMT2O60551 498 aa21.7■■□□□ 1.06
SNRPA1-203ENST00000540017 TANGO6Q9C0B7 1094 aa21.7■■□□□ 1.06
SNRPA1-203ENST00000540017 TSPY2A6NKD2 308 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 WDR46O15213 610 aaKnown RBP21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 RAD21O60216 631 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 RANBP6O60518 1105 aaKnown RBP21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 ERVK-9P63128 1117 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 ERVK-24P63145 666 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 PRKCZQ05513 592 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 LBX2Q6XYB7 198 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 GPRC5AQ8NFJ5 357 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 MKL1Q969V6 931 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 GOPCQ9HD26 462 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 BTBD7Q9P203 1132 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 RAD50Q92878 1312 aa21.69■■□□□ 1.06
SNRPA1-203ENST00000540017 MYH4Q9Y623 1939 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 TNPO2O14787 897 aaKnown RBP21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 SGSM2O43147 1006 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 TTLL1O95922 423 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 PTH1RQ03431 593 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 COG2Q14746 738 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 RRP12Q5JTH9 1297 aaKnown RBP21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 AKNAD1Q5T1N1 836 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 LRRC47Q8N1G4 583 aaKnown RBP21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 STAG1Q8WVM7 1258 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 RUFY2Q8WXA3 655 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 NUP88Q99567 741 aaPredicted RBP21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 PORCNQ9H237 461 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 TOMM22Q9NS69 142 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 FBXO28Q9NVF7 368 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 RABGAP1Q9Y3P9 1069 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 MYPNQ86TC9 1320 aa21.68■■□□□ 1.06
SNRPA1-203ENST00000540017 DOCK3Q8IZD9 2030 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 LAMA4Q16363 1823 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 NEDD4P46934 1319 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 F5H6K3 240 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 ZNF213O14771 459 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 NDUFB10O96000 172 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 HOXD10P28358 340 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 PRMT2P55345 433 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 KLRC3Q07444 240 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 FAM83BQ5T0W9 1011 aa21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 GTF3C2Q8WUA4 911 aaPredicted RBP21.67■■□□□ 1.06
SNRPA1-203ENST00000540017 PARP14Q460N5 1801 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 FLOT1O75955 427 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 DSG3P32926 999 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 FLT3LGP49771 235 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 BMP2KLQ5H9B9 411 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 MFSD6Q6ZSS7 791 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 ATG4CQ96DT6 458 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 HOXC10Q9NYD6 342 aa21.66■■□□□ 1.06
SNRPA1-203ENST00000540017 NOVP48745 357 aa21.65■■□□□ 1.06
SNRPA1-203ENST00000540017 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
SNRPA1-203ENST00000540017 SH3TC2Q8TF17 1288 aa21.65■■□□□ 1.06
SNRPA1-203ENST00000540017 ARMC5Q96C12 935 aa21.65■■□□□ 1.06
SNRPA1-203ENST00000540017 A0A0G2JMZ2 1700 aa21.65■■□□□ 1.06
SNRPA1-203ENST00000540017 SLC9C1Q4G0N8 1177 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 RAET1EQ8TD07 263 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 COA7Q96BR5 231 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 CTNNA3Q9UI47 895 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 GJD2Q9UKL4 321 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 SYNPO2Q9UMS6 1093 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 STX8Q9UNK0 236 aa21.64■■□□□ 1.05
SNRPA1-203ENST00000540017 PCP11498 1178 aaKnown RBP21.63■■□□□ 1.05
SNRPA1-203ENST00000540017 SOX10P56693 466 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms