RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 S100BP04271 92 aaPredicted RBP7.98□□□□□ -1.13
MRE11-209ENST00000540013 NEFMP07197 916 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 RALBP1Q15311 655 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 PRSS36Q5K4E3 855 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 REC114Q7Z4M0 266 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 APBB1IPQ7Z5R6 666 aaPredicted RBP7.98□□□□□ -1.13
MRE11-209ENST00000540013 PMM1Q92871 262 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 TBC1D32Q96NH3 1257 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 ATG3Q9NT62 314 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 DDX56Q9NY93 547 aaKnown RBP7.98□□□□□ -1.13
MRE11-209ENST00000540013 PRKAB1Q9Y478 270 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 KIAA0556O60303 1618 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 PRXQ9BXM0 1461 aa7.98□□□□□ -1.13
MRE11-209ENST00000540013 DIP2BQ9P265 1576 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 GRK4P32298 578 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 CAP2P40123 477 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 SEZ6L2Q6UXD5 910 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 ZAR1Q86SH2 424 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 ABCC10Q5T3U5 1492 aa7.97□□□□□ -1.13
MRE11-209ENST00000540013 TSPOAP1O95153 1857 aa7.96□□□□□ -1.13
MRE11-209ENST00000540013 LRIG2O94898 1065 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 PGRP06401 933 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 NTF4P34130 210 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 CYP27C1Q4G0S4 372 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 DUSP27Q5VZP5 1158 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 CCDC146Q8IYE0 955 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 MKL1Q969V6 931 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 MFSD14AQ96MC6 490 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 GABBR1Q9UBS5 961 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 PCDHGB7Q9Y5F8 929 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 ABCC2Q92887 1545 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 PRR36Q9H6K5 1346 aa7.96□□□□□ -1.14
MRE11-209ENST00000540013 UHRF1BP1LA0JNW5 1464 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 CREB3O43889 395 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 CDK8P49336 464 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 ZNF165P49910 485 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 RACK1P63244 317 aaKnown RBP7.95□□□□□ -1.14
MRE11-209ENST00000540013 SERINC3Q13530 473 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 PLEKHG4Q58EX7 1191 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 SPTY2D1Q68D10 685 aaPredicted RBP7.95□□□□□ -1.14
MRE11-209ENST00000540013 CKAP2LQ8IYA6 745 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 REXO1Q8N1G1 1221 aaKnown RBP7.95□□□□□ -1.14
MRE11-209ENST00000540013 MFSD2AQ8NA29 543 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 NKD1Q969G9 470 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.95□□□□□ -1.14
MRE11-209ENST00000540013 OSBPL1AQ9BXW6 950 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 C1GALT1Q9NS00 363 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 UACAQ9BZF9 1416 aa7.95□□□□□ -1.14
MRE11-209ENST00000540013 GOLGA3Q08378 1498 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 PPP1R12AO14974 1030 aaPredicted RBP7.94□□□□□ -1.14
MRE11-209ENST00000540013 CENPBP07199 599 aaPredicted RBP7.94□□□□□ -1.14
MRE11-209ENST00000540013 PLCG1P19174 1290 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 YARSP54577 528 aaKnown RBP7.94□□□□□ -1.14
MRE11-209ENST00000540013 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
MRE11-209ENST00000540013 TMEM201Q5SNT2 666 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 SLC6A19Q695T7 634 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 OGFOD3Q6PK18 319 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 SLITRK4Q8IW52 837 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
MRE11-209ENST00000540013 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 STAG1Q8WVM7 1258 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 FOXQ1Q9C009 403 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 TYW1Q9NV66 732 aaKnown RBP7.94□□□□□ -1.14
MRE11-209ENST00000540013 EEA1Q15075 1411 aa7.94□□□□□ -1.14
MRE11-209ENST00000540013 WDR64B1ANS9 1081 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 TLR3O15455 904 aaKnown RBP7.93□□□□□ -1.14
MRE11-209ENST00000540013 MAFGO15525 162 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 GRIK1P39086 918 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 GJA8P48165 433 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 TBX4P57082 545 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 SETQ01105 290 aaPredicted RBP7.93□□□□□ -1.14
MRE11-209ENST00000540013 ARMCX6Q7L4S7 300 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 SHKBP1Q8TBC3 707 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 UBP1Q9NZI7 540 aa7.93□□□□□ -1.14
MRE11-209ENST00000540013 G3BP2Q9UN86 482 aaKnown RBP7.93□□□□□ -1.14
MRE11-209ENST00000540013 DYNC1LI2O43237 492 aaPredicted RBP7.92□□□□□ -1.14
MRE11-209ENST00000540013 ATE1O95260 518 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 IMPDH2P12268 514 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 ATF4P18848 351 aaPredicted RBP7.92□□□□□ -1.14
MRE11-209ENST00000540013 CDK5R2Q13319 367 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 MCATQ8IVS2 390 aaKnown RBP7.92□□□□□ -1.14
MRE11-209ENST00000540013 FBXO27Q8NI29 283 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
MRE11-209ENST00000540013 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 TMEM87BQ96K49 555 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 PRDM10Q9NQV6 1147 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 GEMIN8Q9NWZ8 242 aaKnown RBP7.92□□□□□ -1.14
MRE11-209ENST00000540013 RNF112Q9ULX5 631 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 LEMD3Q9Y2U8 911 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 ASXL2Q76L83 1435 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 PLB1Q6P1J6 1458 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 KDM5BQ9UGL1 1544 aa7.92□□□□□ -1.14
MRE11-209ENST00000540013 ZCCHC11Q5TAX3 1644 aaKnown RBP7.92□□□□□ -1.14
MRE11-209ENST00000540013 HTR3BO95264 441 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms