RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 NTRK3Q16288 839 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 APOBEC3HQ6NTF7 200 aaKnown RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 ZNF654Q8IZM8 581 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 ZDHHC15Q96MV8 337 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 CRKP46108 304 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 SCNN1DP51172 638 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 PLCD1P51178 756 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 RESTQ13127 1097 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 CCDC178Q5BJE1 867 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 ANKS1AQ92625 1134 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 DYNLL2Q96FJ2 89 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 TCP11L1Q9NUJ3 509 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 USP40Q9NVE5 1235 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 ORC3Q9UBD5 711 aaPredicted RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 SERPINA10Q9UK55 444 aa11.26□□□□□ -0.61
MDH1-215ENST00000539945 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
MDH1-215ENST00000539945 STK36Q9NRP7 1315 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 MYH1P12882 1939 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 YDJCA8MPS7 323 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 WDHD1O75717 1129 aaPredicted RBP11.25□□□□□ -0.61
MDH1-215ENST00000539945 CALM1P0DP23 149 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 CALM2P0DP24 149 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 CALM3P0DP25 149 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 IFNAR1P17181 557 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 RXRAP19793 462 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
MDH1-215ENST00000539945 RTN1Q16799 776 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 DALRD3Q5D0E6 543 aaKnown RBP11.25□□□□□ -0.61
MDH1-215ENST00000539945 SWT1Q5T5J6 900 aaKnown RBP11.25□□□□□ -0.61
MDH1-215ENST00000539945 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 USP48Q86UV5 1035 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 DGKHQ86XP1 1220 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 KIAA0825Q8IV33 1275 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 MYL10Q9BUA6 226 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 CD2APQ9Y5K6 639 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 PSME4Q14997 1843 aa11.25□□□□□ -0.61
MDH1-215ENST00000539945 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 DDAH1O94760 285 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
MDH1-215ENST00000539945 MBD3O95983 291 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 RASA1P20936 1047 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 IARSP41252 1262 aaKnown RBP11.24□□□□□ -0.61
MDH1-215ENST00000539945 CDK8P49336 464 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 KRT85P78386 507 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 TFAP4Q01664 338 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 FAM47AQ5JRC9 791 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 TTC6Q86TZ1 520 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 CCDC144CPQ8IYA2 1237 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 ZNF444Q8N0Y2 327 aaPredicted RBP11.24□□□□□ -0.61
MDH1-215ENST00000539945 LARGE2Q8N3Y3 721 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 TCHHQ07283 1943 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 MYO3BQ8WXR4 1341 aa11.24□□□□□ -0.61
MDH1-215ENST00000539945 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
MDH1-215ENST00000539945 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 PRR20EP86478 221 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 PRR20CP86479 221 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 PRR20DP86480 221 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 PRR20BP86481 221 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 PRR20AP86496 221 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 SSRP1Q08945 709 aaKnown RBP11.23□□□□□ -0.61
MDH1-215ENST00000539945 TROAPQ12815 778 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
MDH1-215ENST00000539945 ZNF277Q9NRM2 450 aaPredicted RBP11.23□□□□□ -0.61
MDH1-215ENST00000539945 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 RBM28Q9NW13 759 aaKnown RBP11.23□□□□□ -0.61
MDH1-215ENST00000539945 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
MDH1-215ENST00000539945 ADAMTSL1Q8N6G6 1762 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 NMT2O60551 498 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
MDH1-215ENST00000539945 TSPY3P0CV98 308 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 TSPY8P0CW00 308 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
MDH1-215ENST00000539945 GABPAQ06546 454 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 PICALMQ13492 652 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
MDH1-215ENST00000539945 NBPF11Q86T75 865 aa11.22□□□□□ -0.61
MDH1-215ENST00000539945 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms