RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 SMAD3P84022 425 aaKnown RBP17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 SEPT2Q15019 361 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 FAM47AQ5JRC9 791 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 MAGEB6Q8N7X4 407 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 TRIM43Q96BQ3 446 aaPredicted RBP17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 TANGO6Q9C0B7 1094 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 EHD4Q9H223 541 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 GPR108Q9NPR9 543 aa17.85■□□□□ 0.45
CCDC144NL-202ENST00000539177 SEPT4O43236 478 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 COBLO75128 1261 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 TRIM27P14373 513 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 ERCC3P19447 782 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 SHMT1P34896 483 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 SNX17Q15036 470 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 OLFML2BQ68BL8 750 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 TTC6Q86TZ1 520 aa17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 FRAT1Q92837 279 aaPredicted RBP17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 CCDC8Q9H0W5 538 aaPredicted RBP17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 DBNLQ9UJU6 430 aaKnown RBP17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 BAZ2AQ9UIF9 1905 aaKnown RBP17.84■□□□□ 0.45
CCDC144NL-202ENST00000539177 MPHOSPH10O00566 681 aaKnown RBP17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 PLCD1P51178 756 aa17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 PLS1Q14651 629 aa17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 LRRC41Q15345 812 aa17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 RNPC3Q96LT9 517 aaKnown RBP17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 SPATC1LQ9H0A9 340 aa17.83■□□□□ 0.44
CCDC144NL-202ENST00000539177 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 ITGB8P26012 769 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 EVX2Q03828 476 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 TLE2Q04725 743 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 NCAPG2Q86XI2 1143 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 ZNF512BQ96KM6 892 aaPredicted RBP17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 ANTXR1Q9H6X2 564 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
CCDC144NL-202ENST00000539177 STRNO43815 780 aa17.81■□□□□ 0.44
CCDC144NL-202ENST00000539177 BCAR3O75815 825 aa17.81■□□□□ 0.44
CCDC144NL-202ENST00000539177 EPHB4P54760 987 aa17.81■□□□□ 0.44
CCDC144NL-202ENST00000539177 POLA2Q14181 598 aa17.81■□□□□ 0.44
CCDC144NL-202ENST00000539177 COG2Q14746 738 aa17.81■□□□□ 0.44
CCDC144NL-202ENST00000539177 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 USP38Q8NB14 1042 aa17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 SHCBP1Q8NEM2 672 aa17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 MAML3Q96JK9 1138 aa17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 HOXC10Q9NYD6 342 aa17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 GBF1Q92538 1859 aa17.8■□□□□ 0.44
CCDC144NL-202ENST00000539177 IPO8O15397 1037 aaKnown RBP17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 PQBP1O60828 265 aaKnown RBP17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 CLTBP09497 229 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 CERS3Q8IU89 383 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 CLEC10AQ8IUN9 316 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 SYMPKQ92797 1274 aaKnown RBP17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 ATG4CQ96DT6 458 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 XPNPEP3Q9NQH7 507 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 SLC5A4Q9NY91 659 aa17.79■□□□□ 0.44
CCDC144NL-202ENST00000539177 IGSF3O75054 1194 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 FLOT1O75955 427 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 PGK1P00558 417 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 MAP3K12Q12852 859 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 GRIN2CQ14957 1233 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 SPICE1Q8N0Z3 855 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 PHF24Q9UPV7 400 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 TACC3Q9Y6A5 838 aa17.78■□□□□ 0.44
CCDC144NL-202ENST00000539177 RARBP10826 455 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 RAG1P15918 1043 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 DSG3P32926 999 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 ATP8B2P98198 1209 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 GABPAQ06546 454 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 RIOK1Q9BRS2 568 aaKnown RBP17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 MROH8Q9H579 483 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 MCM9Q9NXL9 1143 aa17.77■□□□□ 0.44
CCDC144NL-202ENST00000539177 MYO9BQ13459 2157 aa17.77■□□□□ 0.43
CCDC144NL-202ENST00000539177 MCM3APO60318 1980 aa17.77■□□□□ 0.43
CCDC144NL-202ENST00000539177 TMEM265A0A087WTH1 108 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 MAGEB6P1A0A0J9YX57 407 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 A0A1W2PQ45 241 aaPredicted RBP17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 A0A1W2PQY0 241 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 PGK2P07205 417 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 CYP2D6P10635 497 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 FCER1AP12319 257 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 DNAJB2P25686 324 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 FPGSQ05932 587 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 MB21D1Q8N884 522 aa17.76■□□□□ 0.43
CCDC144NL-202ENST00000539177 TAL1P17542 331 aaPredicted RBP17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 COL9A1P20849 921 aa17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 TJAP1Q5JTD0 557 aa17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 RNF180Q86T96 592 aa17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 ABRAQ8N0Z2 381 aa17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 SDR42E1Q8WUS8 393 aa17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 PPM1EQ8WY54 764 aa17.75■□□□□ 0.43
CCDC144NL-202ENST00000539177 MMP19Q99542 508 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms