RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 RBPJLQ9UBG7 517 aa14.66□□□□□ -0.06
CLTCL1-205ENST00000538828 ZSWIM8A7E2V4 1837 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 IGKV6D-41A0A0C4DH26 115 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 SDSP20132 328 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 ERVK-9P63128 1117 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 ERVK-24P63145 666 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 MLLT1Q03111 559 aaPredicted RBP14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 NEDD1Q8NHV4 660 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 SOCS4Q8WXH5 440 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 GOPCQ9HD26 462 aa14.65□□□□□ -0.06
CLTCL1-205ENST00000538828 A0A0D9SFI3 127 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 SMIM22K7EJ46 135 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 XRCC5P13010 732 aaKnown RBP14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 EEF2P13639 858 aaKnown RBP14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 FLT3LGP49771 235 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 PRKCZQ05513 592 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 TRMT44Q8IYL2 757 aaKnown RBP14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 RILPL2Q969X0 211 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 RPAP3Q9H6T3 665 aaPredicted RBP14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 GJD2Q9UKL4 321 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 CENPFP49454 3210 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 RLFQ13129 1914 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 PDE4DIPQ5VU43 2346 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
CLTCL1-205ENST00000538828 SPDYE16A6NNV3 312 aaPredicted RBP14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 ORC4O43929 436 aa14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 HSPD1P10809 573 aaKnown RBP14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 UBXN2AP68543 259 aa14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 ZYXQ15942 572 aaKnown RBP14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 FAM227BQ96M60 508 aa14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 TXNRD2Q9NNW7 524 aa14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 MTMR4Q9NYA4 1195 aa14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 ADAMTS5Q9UNA0 930 aa14.63□□□□□ -0.07
CLTCL1-205ENST00000538828 TTLL1O95922 423 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 FGAP02671 866 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 DSG3P32926 999 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 NOVP48745 357 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 NMIQ13287 307 aaPredicted RBP14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 TTC22Q5TAA0 569 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 SHCBP1Q8NEM2 672 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 NKX2-3Q8TAU0 364 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 NUDT12Q9BQG2 462 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 DIAPH3Q9NSV4 1193 aa14.62□□□□□ -0.07
CLTCL1-205ENST00000538828 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 STRNO43815 780 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 ADCY3O60266 1144 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 CNMDO75829 334 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 TSPY3P0CV98 308 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 TSPY8P0CW00 308 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 PDE4AP27815 886 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 Q3C1V9 767 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 VPS53Q5VIR6 699 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 ZNF589Q86UQ0 364 aaPredicted RBP14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 GMCL1P1Q8NEA9 526 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 USP6NLQ92738 828 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 DSCC1Q9BVC3 393 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 GABRQQ9UN88 632 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 PARP14Q460N5 1801 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 RAD50Q92878 1312 aa14.61□□□□□ -0.07
CLTCL1-205ENST00000538828 MYH4Q9Y623 1939 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 FDX1P10109 184 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 COPB2P35606 906 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 SOX10P56693 466 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 KIAA1755Q5JYT7 1200 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 MORN1Q5T089 497 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 TCP11L1Q9NUJ3 509 aa14.6□□□□□ -0.07
CLTCL1-205ENST00000538828 SLC15A5A6NIM6 579 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 F5H6K3 240 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 PLA2G6O60733 806 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 FLOT1O75955 427 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 SLC25A27O95847 323 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 GJB1P08034 283 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 HOXC6P09630 235 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 IRX6P78412 446 aaPredicted RBP14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 TFAP4Q01664 338 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 KLRC3Q07444 240 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 CLEC10AQ8IUN9 316 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 ABRAQ8N0Z2 381 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 SH3TC2Q8TF17 1288 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 CEP95Q96GE4 821 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 PAGR1Q9BTK6 254 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 RNF41Q9H4P4 317 aaPredicted RBP14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 BTBD7Q9P203 1132 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 PLXNB2O15031 1838 aa14.59□□□□□ -0.07
CLTCL1-205ENST00000538828 ZNF236Q9UL36 1845 aa14.58□□□□□ -0.08
CLTCL1-205ENST00000538828 TSPY2A6NKD2 308 aa14.58□□□□□ -0.08
CLTCL1-205ENST00000538828 ATP2A1O14983 1001 aa14.58□□□□□ -0.08
CLTCL1-205ENST00000538828 PRDM1O75626 825 aa14.58□□□□□ -0.08
CLTCL1-205ENST00000538828 HMGCRP04035 888 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms