RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
CD4-208ENST00000538827 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
CD4-208ENST00000538827 NCOA5Q9HCD5 579 aaKnown RBP16.53■□□□□ 0.24
CD4-208ENST00000538827 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
CD4-208ENST00000538827 IGKV6D-41A0A0C4DH26 115 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 DDAH1O94760 285 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 FMR1Q06787 632 aaKnown RBP eCLIP16.52■□□□□ 0.24
CD4-208ENST00000538827 SCRN1Q12765 414 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 CUL4AQ13619 759 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 PPP4R3BQ5MIZ7 849 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 CDCA5Q96FF9 252 aa16.52■□□□□ 0.24
CD4-208ENST00000538827 MYH6P13533 1939 aa16.52■□□□□ 0.23
CD4-208ENST00000538827 TRPM7Q96QT4 1865 aa16.52■□□□□ 0.23
CD4-208ENST00000538827 PAPPA2Q9BXP8 1791 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 RAD21O60216 631 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 DTNBO60941 627 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 TTLL1O95922 423 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
CD4-208ENST00000538827 NF2P35240 595 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 SOX10P56693 466 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 EVCP57679 992 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 RTN1Q16799 776 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 WRNIP1Q96S55 665 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 TMEM47Q9BQJ4 181 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.51■□□□□ 0.23
CD4-208ENST00000538827 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
CD4-208ENST00000538827 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 HPS5Q9UPZ3 1129 aa16.51■□□□□ 0.23
CD4-208ENST00000538827 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
CD4-208ENST00000538827 TRAF5O00463 557 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 CPLX1O14810 134 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 CALM1P0DP23 149 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 CALM2P0DP24 149 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 CALM3P0DP25 149 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 CAP2P40123 477 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 JAG1P78504 1218 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 NOGQ13253 232 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 TTLL12Q14166 644 aaPredicted RBP16.5■□□□□ 0.23
CD4-208ENST00000538827 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 ISY1Q9ULR0 285 aaKnown RBP16.5■□□□□ 0.23
CD4-208ENST00000538827 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 NID2Q14112 1375 aa16.5■□□□□ 0.23
CD4-208ENST00000538827 CCDC84Q86UT8 332 aaPredicted RBP16.49■□□□□ 0.23
CD4-208ENST00000538827 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
CD4-208ENST00000538827 ANKS1AQ92625 1134 aa16.49■□□□□ 0.23
CD4-208ENST00000538827 ZNF408Q9H9D4 720 aa16.49■□□□□ 0.23
CD4-208ENST00000538827 KANSL2Q9H9L4 492 aa16.49■□□□□ 0.23
CD4-208ENST00000538827 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 PHF20L1A8MW92 1017 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 JAK2O60674 1132 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
CD4-208ENST00000538827 ASNSP08243 561 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
CD4-208ENST00000538827 INPP5BP32019 993 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
CD4-208ENST00000538827 RASGRP2Q7LDG7 609 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 INTS4Q96HW7 963 aaKnown RBP16.48■□□□□ 0.23
CD4-208ENST00000538827 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
CD4-208ENST00000538827 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
CD4-208ENST00000538827 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
CD4-208ENST00000538827 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 CDC27P30260 824 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 RCAN1P53805 252 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 GRM4Q14833 912 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 DDX11Q96FC9 970 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 FEZ1Q99689 392 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 PICK1Q9NRD5 415 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
CD4-208ENST00000538827 SAGE1Q9NXZ1 904 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
CD4-208ENST00000538827 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.23
CD4-208ENST00000538827 CDKL5O76039 1030 aa16.46■□□□□ 0.23
CD4-208ENST00000538827 GJB2P29033 226 aa16.46■□□□□ 0.23
CD4-208ENST00000538827 KIF5BP33176 963 aa16.46■□□□□ 0.23
CD4-208ENST00000538827 IREB2P48200 963 aaKnown RBP16.46■□□□□ 0.23
CD4-208ENST00000538827 NOVP48745 357 aa16.46■□□□□ 0.23
CD4-208ENST00000538827 FOSBP53539 338 aa16.46■□□□□ 0.23
CD4-208ENST00000538827 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
CD4-208ENST00000538827 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
CD4-208ENST00000538827 NSUN7Q8NE18 718 aaKnown RBP16.46■□□□□ 0.23
CD4-208ENST00000538827 ZKSCAN4Q969J2 545 aaPredicted RBP16.46■□□□□ 0.23
CD4-208ENST00000538827 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
CD4-208ENST00000538827 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 PLEKHA8P1O95397 391 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
CD4-208ENST00000538827 TROAPQ12815 778 aa16.45■□□□□ 0.22
CD4-208ENST00000538827 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms