RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 GJA8P48165 433 aa25.62■■□□□ 1.69
CCDC78-215ENST00000538176 SIAH1Q8IUQ4 282 aa25.62■■□□□ 1.69
CCDC78-215ENST00000538176 ZNF444Q8N0Y2 327 aaPredicted RBP25.62■■□□□ 1.69
CCDC78-215ENST00000538176 MB21D1Q8N884 522 aa25.62■■□□□ 1.69
CCDC78-215ENST00000538176 EXOC6Q8TAG9 804 aa25.62■■□□□ 1.69
CCDC78-215ENST00000538176 CWC22Q9HCG8 908 aaKnown RBP25.62■■□□□ 1.69
CCDC78-215ENST00000538176 TNRC18O15417 2968 aaPredicted RBP25.61■■□□□ 1.69
CCDC78-215ENST00000538176 INHAP05111 366 aa25.61■■□□□ 1.69
CCDC78-215ENST00000538176 LNPKQ9C0E8 428 aa25.61■■□□□ 1.69
CCDC78-215ENST00000538176 NAPBQ9H115 298 aa25.61■■□□□ 1.69
CCDC78-215ENST00000538176 GOPCQ9HD26 462 aa25.61■■□□□ 1.69
CCDC78-215ENST00000538176 HELLSQ9NRZ9 838 aa25.61■■□□□ 1.69
CCDC78-215ENST00000538176 WDR46O15213 610 aaKnown RBP25.6■■□□□ 1.69
CCDC78-215ENST00000538176 HMGCRP04035 888 aa25.6■■□□□ 1.69
CCDC78-215ENST00000538176 EEF2P13639 858 aaKnown RBP25.6■■□□□ 1.69
CCDC78-215ENST00000538176 ELNP15502 786 aa25.6■■□□□ 1.69
CCDC78-215ENST00000538176 PDE4BQ07343 736 aa25.6■■□□□ 1.69
CCDC78-215ENST00000538176 PRPF38BQ5VTL8 546 aaKnown RBP25.6■■□□□ 1.69
CCDC78-215ENST00000538176 PLEKHH3Q7Z736 793 aa25.6■■□□□ 1.69
CCDC78-215ENST00000538176 CHD1LQ86WJ1 897 aa25.6■■□□□ 1.69
CCDC78-215ENST00000538176 TANGO6Q9C0B7 1094 aa25.6■■□□□ 1.69
CCDC78-215ENST00000538176 SPDYE16A6NNV3 312 aaPredicted RBP25.59■■□□□ 1.69
CCDC78-215ENST00000538176 RASA1P20936 1047 aa25.59■■□□□ 1.69
CCDC78-215ENST00000538176 NUCB1Q02818 461 aa25.59■■□□□ 1.69
CCDC78-215ENST00000538176 GPR142Q7Z601 462 aa25.59■■□□□ 1.69
CCDC78-215ENST00000538176 SEC62Q99442 399 aaKnown RBP25.59■■□□□ 1.69
CCDC78-215ENST00000538176 OSBPL3Q9H4L5 887 aa25.59■■□□□ 1.69
CCDC78-215ENST00000538176 EPB41L4AQ9HCS5 686 aaPredicted RBP25.59■■□□□ 1.69
CCDC78-215ENST00000538176 SMIM22K7EJ46 135 aa25.58■■□□□ 1.69
CCDC78-215ENST00000538176 RGS2P41220 211 aa25.58■■□□□ 1.69
CCDC78-215ENST00000538176 B4GALNT3Q6L9W6 998 aa25.58■■□□□ 1.69
CCDC78-215ENST00000538176 NYAP2Q9P242 653 aa25.58■■□□□ 1.69
CCDC78-215ENST00000538176 SYNPO2Q9UMS6 1093 aa25.58■■□□□ 1.69
CCDC78-215ENST00000538176 IVNS1ABPQ9Y6Y0 642 aa25.58■■□□□ 1.69
CCDC78-215ENST00000538176 CNMDO75829 334 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 SGPL1O95470 568 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 IGHDP01880 384 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 DSG3P32926 999 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 ATP2B2Q01814 1243 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 POTEEQ6S8J3 1075 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 UNC93B1Q9H1C4 597 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 PORCNQ9H237 461 aa25.57■■□□□ 1.68
CCDC78-215ENST00000538176 STRNO43815 780 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 FLOT1O75955 427 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 CYP2B6P20813 491 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 PPP4R3BQ5MIZ7 849 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 MORN1Q5T089 497 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 U2AF1L4Q8WU68 220 aaKnown RBP25.56■■□□□ 1.68
CCDC78-215ENST00000538176 USP6NLQ92738 828 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 PAK6Q9NQU5 681 aaPredicted RBP25.56■■□□□ 1.68
CCDC78-215ENST00000538176 RPTORQ8N122 1335 aa25.56■■□□□ 1.68
CCDC78-215ENST00000538176 SLC15A5A6NIM6 579 aa25.55■■□□□ 1.68
CCDC78-215ENST00000538176 TRIM6-TRIM34B2RNG4 842 aa25.55■■□□□ 1.68
CCDC78-215ENST00000538176 MCMDC2Q4G0Z9 681 aa25.55■■□□□ 1.68
CCDC78-215ENST00000538176 SHCBP1Q8NEM2 672 aa25.55■■□□□ 1.68
CCDC78-215ENST00000538176 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCDC78-215ENST00000538176 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
CCDC78-215ENST00000538176 BTBD7Q9P203 1132 aa25.55■■□□□ 1.68
CCDC78-215ENST00000538176 PEX10O60683 326 aa25.54■■□□□ 1.68
CCDC78-215ENST00000538176 PPARAQ07869 468 aa25.54■■□□□ 1.68
CCDC78-215ENST00000538176 MAP2K5Q13163 448 aa25.54■■□□□ 1.68
CCDC78-215ENST00000538176 SPICE1Q8N0Z3 855 aa25.54■■□□□ 1.68
CCDC78-215ENST00000538176 MKL1Q969V6 931 aa25.54■■□□□ 1.68
CCDC78-215ENST00000538176 PTPREP23469 700 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 MFAP1P55081 439 aaKnown RBP25.53■■□□□ 1.68
CCDC78-215ENST00000538176 ALX1Q15699 326 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 KIAA1755Q5JYT7 1200 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 CLEC10AQ8IUN9 316 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 PLEKHM2Q8IWE5 1019 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 APBA2Q99767 749 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 SPATC1LQ9H0A9 340 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 MROH8Q9H579 483 aa25.53■■□□□ 1.68
CCDC78-215ENST00000538176 TFRCP02786 760 aaKnown RBP25.52■■□□□ 1.68
CCDC78-215ENST00000538176 TSPY3P0CV98 308 aa25.52■■□□□ 1.68
CCDC78-215ENST00000538176 TSPY8P0CW00 308 aa25.52■■□□□ 1.68
CCDC78-215ENST00000538176 ZKSCAN1P17029 563 aaPredicted RBP25.52■■□□□ 1.68
CCDC78-215ENST00000538176 WDR78Q5VTH9 848 aa25.52■■□□□ 1.68
CCDC78-215ENST00000538176 STK11IPQ8N1F8 1099 aa25.52■■□□□ 1.68
CCDC78-215ENST00000538176 NEDD1Q8NHV4 660 aa25.52■■□□□ 1.68
CCDC78-215ENST00000538176 ADAMTS5Q9UNA0 930 aa25.52■■□□□ 1.68
CCDC78-215ENST00000538176 BRCA2P51587 3418 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 IGKV6D-41A0A0C4DH26 115 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 TTLL1O95922 423 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 HOXC6P09630 235 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 TRIB2Q92519 343 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 RILPL2Q969X0 211 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 SHISA4Q96DD7 197 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 DEFB118Q96PH6 123 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.51■■□□□ 1.67
CCDC78-215ENST00000538176 SLC5A4Q9NY91 659 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 MTMR4Q9NYA4 1195 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 ANAPC4Q9UJX5 808 aa25.51■■□□□ 1.67
CCDC78-215ENST00000538176 F5H6K3 240 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 SLC25A27O95847 323 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 KLRC3Q07444 240 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 GRB14Q14449 540 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 MAP3K21Q5TCX8 1036 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 HTATIP2Q9BUP3 242 aa25.5■■□□□ 1.67
CCDC78-215ENST00000538176 MOV10L1Q9BXT6 1211 aaKnown RBP25.5■■□□□ 1.67
CCDC78-215ENST00000538176 CRISPLD2Q9H0B8 497 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms