RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 N4BP2Q86UW6 1770 aaPredicted RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 MFAP3LO75121 409 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 NNTQ13423 1086 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 SLC5A9Q2M3M2 681 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 CAPRIN2Q6IMN6 1127 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 OLFM4Q6UX06 510 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 CLASRPQ8N2M8 674 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 AIDAQ96BJ3 306 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 PANX2Q96RD6 677 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 BAIAP2L1Q9UHR4 511 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 E7EVH7 732 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 ALDH1L1O75891 902 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 SMNDC1O75940 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
RTN3-208ENST00000537981 ECEL1O95672 775 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 LINGO3P0C6S8 592 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 CMA1P23946 247 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 BYSLQ13895 437 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 RBBP5Q15291 538 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 C1QTNF12Q5T7M4 302 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 RCSD1Q6JBY9 416 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 YTHDF3Q7Z739 585 aaKnown RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 LRRC1Q9BTT6 524 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 PIDD1Q9HB75 910 aa11.98□□□□□ -0.49
RTN3-208ENST00000537981 ZNF142P52746 1687 aaPredicted RBP11.98□□□□□ -0.49
RTN3-208ENST00000537981 MYH10P35580 1976 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 MYO5BQ9ULV0 1848 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 PYGBP11216 843 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 MATR3P43243 847 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■□□□ 13.3
RTN3-208ENST00000537981 GRIN1Q05586 938 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 ANKRD20A8PQ5CZ79 823 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 KCNG4Q8TDN1 519 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 NOD2Q9HC29 1040 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 MAN1B1Q9UKM7 699 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 ATP6V1G2O95670 118 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 TCF3P15923 654 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 CASP1P29466 404 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 TRAF1Q13077 416 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 ANO1Q5XXA6 986 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 KLHDC4Q8TBB5 520 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
RTN3-208ENST00000537981 FAM167BQ9BTA0 163 aa11.97□□□□□ -0.49
RTN3-208ENST00000537981 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
RTN3-208ENST00000537981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
RTN3-208ENST00000537981 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
RTN3-208ENST00000537981 A0A1B0GTH6 734 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 ZNF233A6NK53 670 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 GOLGA8KD6RF30 607 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 SCTRP47872 440 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 SLC8A3P57103 927 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 TEFQ10587 303 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 ATL3Q6DD88 541 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 CYFIP2Q96F07 1278 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 POLR3EQ9NVU0 708 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 HPSEQ9Y251 543 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 DUSP10Q9Y6W6 482 aa11.96□□□□□ -0.49
RTN3-208ENST00000537981 ZSCAN5CA6NGD5 496 aaPredicted RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 BUB1BO60566 1050 aaPredicted RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 PPP1R37O75864 691 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 FAM153BP0C7A2 387 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 PDIA3P30101 505 aaKnown RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 CCT6AP40227 531 aaKnown RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 ABL2P42684 1182 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 MTHFSDQ2M296 383 aaKnown RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 FAM153CQ494X1 144 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.5
RTN3-208ENST00000537981 PSMB7Q99436 277 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 FAM153AQ9UHL3 310 aa11.96□□□□□ -0.5
RTN3-208ENST00000537981 JCADQ9P266 1359 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 RCCD1A6NED2 376 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 SASH1O94885 1247 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 ANP32DO95626 131 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 HPDP32754 393 aaPredicted RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 ELF3P78545 371 aaPredicted RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 FOXD4Q12950 439 aaPredicted RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 PLCB4Q15147 1175 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 GNPTABQ3T906 1256 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 CCDC121Q6ZUS5 278 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 PPFIBP1Q86W92 1011 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 DRAXINQ8NBI3 349 aaPredicted RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 PAGR1Q9BTK6 254 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 PCDHGC5Q9Y5F6 944 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 TMEM131LA2VDJ0 1609 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 ANKRD18BA2A2Z9 1011 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 MGRN1O60291 552 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 PBX1P40424 430 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 TAF7Q15545 349 aaPredicted RBP11.95□□□□□ -0.5
RTN3-208ENST00000537981 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
RTN3-208ENST00000537981 ACSBG1Q96GR2 724 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms