RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
SPARC-207ENST00000537849 A0A1W2PRG0 241 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 IQCA1LA6NCM1 817 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
SPARC-207ENST00000537849 PDIA4P13667 645 aaKnown RBP13.64□□□□□ -0.23
SPARC-207ENST00000537849 PDCP20941 246 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
SPARC-207ENST00000537849 SUPT20HL1Q3ZLR7 823 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 LRRC47Q8N1G4 583 aaKnown RBP13.64□□□□□ -0.23
SPARC-207ENST00000537849 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
SPARC-207ENST00000537849 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
SPARC-207ENST00000537849 HOOK2Q96ED9 719 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 ZNF341Q9BYN7 854 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 GINM1Q9NU53 330 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 TCHHQ07283 1943 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 ATAD5Q96QE3 1844 aa13.64□□□□□ -0.23
SPARC-207ENST00000537849 ADM5C9JUS6 153 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 UBE2Q2LH0YL09 131 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 CTNND1O60716 968 aaKnown RBP13.63□□□□□ -0.23
SPARC-207ENST00000537849 USP2O75604 605 aaPredicted RBP13.63□□□□□ -0.23
SPARC-207ENST00000537849 ZSCAN22P10073 491 aaPredicted RBP13.63□□□□□ -0.23
SPARC-207ENST00000537849 PDHBP11177 359 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 SMARCA1P28370 1054 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 KIF5BP33176 963 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 GNAQP50148 359 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 ICA1Q05084 483 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 USP17L2Q6R6M4 530 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 SULF1Q8IWU6 871 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 CCDC82Q8N4S0 544 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 FAM184AQ8NB25 1140 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 RGS22Q8NE09 1264 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 ACER1Q8TDN7 264 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
SPARC-207ENST00000537849 WDR33Q9C0J8 1336 aaKnown RBP13.63□□□□□ -0.23
SPARC-207ENST00000537849 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
SPARC-207ENST00000537849 KLRF2D3W0D1 207 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 ASNSP08243 561 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
SPARC-207ENST00000537849 INPP5BP32019 993 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 PKN1Q16512 942 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 KRT26Q7Z3Y9 468 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 PNMA8AQ86V59 439 aaPredicted RBP13.62□□□□□ -0.23
SPARC-207ENST00000537849 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 AIFM3Q96NN9 605 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 LZTS2Q9BRK4 669 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 RNF26Q9BY78 433 aaPredicted RBP13.62□□□□□ -0.23
SPARC-207ENST00000537849 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.62□□□□□ -0.23
SPARC-207ENST00000537849 SYNPO2Q9UMS6 1093 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 MTMR7Q9Y216 660 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 TMX2Q9Y320 296 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 KIF3AQ9Y496 699 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
SPARC-207ENST00000537849 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 F5H6K3 240 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 CYTH3O43739 400 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 DEXIO95424 95 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 GOLGA8HP0CJ92 632 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 VEGFAP15692 232 aaPredicted RBP13.61□□□□□ -0.23
SPARC-207ENST00000537849 KLRC3Q07444 240 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 EAPPQ56P03 285 aaPredicted RBP13.61□□□□□ -0.23
SPARC-207ENST00000537849 FOXD4L5Q5VV16 416 aaPredicted RBP13.61□□□□□ -0.23
SPARC-207ENST00000537849 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 GMCL1P1Q8NEA9 526 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 FOXD4L4Q8WXT5 416 aaPredicted RBP13.61□□□□□ -0.23
SPARC-207ENST00000537849 ALG1Q9BT22 464 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 FZD1Q9UP38 647 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
SPARC-207ENST00000537849 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 ECE1P42892 770 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 OTUD7BQ6GQQ9 843 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 CCDC84Q86UT8 332 aaPredicted RBP13.6□□□□□ -0.23
SPARC-207ENST00000537849 TRIM22Q8IYM9 498 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 DCAF4Q8WV16 495 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 ZKSCAN4Q969J2 545 aaPredicted RBP13.6□□□□□ -0.23
SPARC-207ENST00000537849 SPZ1Q9BXG8 430 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
SPARC-207ENST00000537849 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 ARHGEF10LQ9HCE6 1279 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 GJB4Q9NTQ9 266 aa13.6□□□□□ -0.23
SPARC-207ENST00000537849 hCG_1642624A0A1W2PR95 340 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 VPS37CA5D8V6 355 aaPredicted RBP13.59□□□□□ -0.23
SPARC-207ENST00000537849 NDUFB10O96000 172 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 F13A1P00488 732 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
SPARC-207ENST00000537849 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms