RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 CCDC34Q96HJ3 373 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 FLT1P17948 1338 aa17.92■□□□□ 0.46
MKS1-204ENST00000537529 USP17L3A6NCW0 530 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 USP17L4A6NCW7 530 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 MDM2Q00987 491 aaPredicted RBP17.91■□□□□ 0.46
MKS1-204ENST00000537529 NCAPHQ15003 741 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 ISM2Q6H9L7 571 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 USP17L1Q7RTZ2 530 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 SLC44A5Q8NCS7 719 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 COA1Q9GZY4 146 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 SERTAD1Q9UHV2 236 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 PCDHA5Q9Y5H7 936 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 MYL5Q02045 173 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 LRMPQ12912 555 aa17.91■□□□□ 0.46
MKS1-204ENST00000537529 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 MYO1BO43795 1136 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 SMC2O95347 1197 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 NPR1P16066 1061 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 CDK8P49336 464 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 RHBDL3P58872 404 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 CACTINQ8WUQ7 758 aaKnown RBP17.9■□□□□ 0.46
MKS1-204ENST00000537529 LZTS2Q9BRK4 669 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 SUGT1Q9Y2Z0 365 aa17.9■□□□□ 0.46
MKS1-204ENST00000537529 ACTN4O43707 911 aaKnown RBP17.89■□□□□ 0.45
MKS1-204ENST00000537529 GSDMDP57764 484 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 ZNF827Q17R98 1081 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 SMARCE1Q969G3 411 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 EYA3Q99504 573 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 IMPACTQ9P2X3 320 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 MAD2L2Q9UI95 211 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 ATP2C1P98194 919 aaPredicted RBP17.89■□□□□ 0.45
MKS1-204ENST00000537529 ZNF174Q15697 407 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 NT5DC1Q5TFE4 455 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 PIK3AP1Q6ZUJ8 805 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 FOXP4Q8IVH2 680 aaPredicted RBP17.89■□□□□ 0.45
MKS1-204ENST00000537529 TRIML1Q8N9V2 468 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 TMEM47Q9BQJ4 181 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 IFNKQ9P0W0 207 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 DACH1Q9UI36 760 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 STX8Q9UNK0 236 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 NRXN2Q9P2S2 1712 aa17.89■□□□□ 0.45
MKS1-204ENST00000537529 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 FOXN1O15353 648 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 GTF2IP78347 998 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 LRRC8AQ8IWT6 810 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 BLIDQ8IZY5 108 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 STAG2Q8N3U4 1231 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 CCDC148Q8NFR7 591 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 NEDD1Q8NHV4 660 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 XPO4Q9C0E2 1151 aaKnown RBP17.88■□□□□ 0.45
MKS1-204ENST00000537529 MAN1B1Q9UKM7 699 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 DAGLAQ9Y4D2 1042 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 CDK5RAP2Q96SN8 1893 aa17.88■□□□□ 0.45
MKS1-204ENST00000537529 SRGNP10124 158 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 DHX8Q14562 1220 aaKnown RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 FILIP1Q7Z7B0 1213 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 FAM177A1Q8N128 213 aaPredicted RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 PDILTQ8N807 584 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 PRIMPOLQ96LW4 560 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 PCDHA4Q9UN74 947 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 RIMBP2O15034 1052 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 PLSCR1O15162 318 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 ALDH1B1P30837 517 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 PDE6BP35913 854 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 USP49Q70CQ1 688 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 MLKLQ8NB16 471 aa17.87■□□□□ 0.45
MKS1-204ENST00000537529 SYMPKQ92797 1274 aaKnown RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 ZC3H12CQ9C0D7 883 aaKnown RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 OSBPL5Q9H0X9 879 aaPredicted RBP17.87■□□□□ 0.45
MKS1-204ENST00000537529 UQCRHLA0A096LP55 91 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 PALM3A6NDB9 673 aaPredicted RBP17.86■□□□□ 0.45
MKS1-204ENST00000537529 WNT7AO00755 349 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 CBFA2T2O43439 604 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 UQCRHP07919 91 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 PRR29P0C7W0 189 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 LMOD1P29536 600 aaPredicted RBP17.86■□□□□ 0.45
MKS1-204ENST00000537529 SARSP49591 514 aaKnown RBP17.86■□□□□ 0.45
MKS1-204ENST00000537529 FANCCQ00597 558 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 PTGDRQ13258 359 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 GALNT17Q6IS24 598 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 GPKOWQ92917 476 aaPredicted RBP eCLIP17.86■□□□□ 0.45
MKS1-204ENST00000537529 SLFN14P0C7P3 912 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 VEGFAP15692 232 aaPredicted RBP17.86■□□□□ 0.45
MKS1-204ENST00000537529 MORC3Q14149 939 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 DAGLBQ8NCG7 672 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 DHX58Q96C10 678 aa17.86■□□□□ 0.45
MKS1-204ENST00000537529 TMX4Q9H1E5 349 aaPredicted RBP17.86■□□□□ 0.45
MKS1-204ENST00000537529 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
MKS1-204ENST00000537529 CCDC150Q8NCX0 1101 aa17.85■□□□□ 0.45
MKS1-204ENST00000537529 EPSTI1Q96J88 318 aa17.85■□□□□ 0.45
MKS1-204ENST00000537529 PYM1Q9BRP8 204 aaKnown RBP17.85■□□□□ 0.45
MKS1-204ENST00000537529 SPZ1Q9BXG8 430 aa17.85■□□□□ 0.45
MKS1-204ENST00000537529 PARP3Q9Y6F1 533 aa17.85■□□□□ 0.45
MKS1-204ENST00000537529 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms