RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 NCOA5Q9HCD5 579 aaKnown RBP13.47□□□□□ -0.25
CDCA3-206ENST00000536241 GBA2Q9HCG7 927 aaPredicted RBP13.47□□□□□ -0.25
CDCA3-206ENST00000536241 CSADQ9Y600 493 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
CDCA3-206ENST00000536241 GREB1LQ9C091 1923 aaPredicted RBP13.46□□□□□ -0.25
CDCA3-206ENST00000536241 RAD21O60216 631 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 TOMM70O94826 608 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 CDC27P30260 824 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 ADD1P35611 737 aaKnown RBP13.46□□□□□ -0.25
CDCA3-206ENST00000536241 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDCA3-206ENST00000536241 ST3GAL1Q11201 340 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 LDLRAD1Q5T700 205 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 SMC1BQ8NDV3 1235 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
CDCA3-206ENST00000536241 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 FAM217BQ9NTX9 383 aaPredicted RBP13.46□□□□□ -0.25
CDCA3-206ENST00000536241 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 TMX2Q9Y320 296 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
CDCA3-206ENST00000536241 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 F5H6K3 240 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 DDAH1O94760 285 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 KLRC3Q07444 240 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 SPP2Q13103 211 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 CUL4AQ13619 759 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
CDCA3-206ENST00000536241 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
CDCA3-206ENST00000536241 CALM1P0DP23 149 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 CALM2P0DP24 149 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 CALM3P0DP25 149 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 FKBP1BP68106 108 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
CDCA3-206ENST00000536241 RTN1Q16799 776 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 KIAA1755Q5JYT7 1200 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 STAG2Q8N3U4 1231 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 WDR18Q9BV38 432 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 AS3MTQ9HBK9 375 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 MYH4Q9Y623 1939 aa13.44□□□□□ -0.26
CDCA3-206ENST00000536241 PASKQ96RG2 1323 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 HSP90AA1P07900 732 aaKnown RBP13.43□□□□□ -0.26
CDCA3-206ENST00000536241 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 PDHBP11177 359 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 RCAN1P53805 252 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 SLFN13Q68D06 897 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 CMTR1Q8N1G2 835 aaKnown RBP13.43□□□□□ -0.26
CDCA3-206ENST00000536241 CCDC82Q8N4S0 544 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 ZNF280CQ8ND82 737 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 CTCFLQ8NI51 663 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-206ENST00000536241 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
CDCA3-206ENST00000536241 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 FEZ1Q99689 392 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 MAD2L2Q9UI95 211 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
CDCA3-206ENST00000536241 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-206ENST00000536241 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 CPLX1O14810 134 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 PARP1P09874 1014 aaKnown RBP13.42□□□□□ -0.26
CDCA3-206ENST00000536241 GRM4Q14833 912 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 ERO1BQ86YB8 467 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 KIAA1683Q9H0B3 1180 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 GOPCQ9HD26 462 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 GPCPD1Q9NPB8 672 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 SYNPO2Q9UMS6 1093 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-206ENST00000536241 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
CDCA3-206ENST00000536241 NDUFB10O96000 172 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 KIF5BP33176 963 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 SLC1A4P43007 532 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 BACE1P56817 501 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 PPATQ06203 517 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 DGKZQ13574 1117 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 MTMR2Q13614 643 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 NTRK3Q16288 839 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 KCTD1Q719H9 257 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 OPTNQ96CV9 577 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 OTUD5Q96G74 571 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 NUP88Q99567 741 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-206ENST00000536241 SH2D4AQ9H788 454 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CDCA3-206ENST00000536241 RBM28Q9NW13 759 aaKnown RBP13.42□□□□□ -0.26
CDCA3-206ENST00000536241 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
CDCA3-206ENST00000536241 DOCK1Q14185 1865 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms