RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SSH3Q8TE77 659 aa9.77□□□□□ -0.85
CHFR-211ENST00000535897 BADQ92934 168 aa9.77□□□□□ -0.85
CHFR-211ENST00000535897 FERMT2Q96AC1 680 aa9.77□□□□□ -0.85
CHFR-211ENST00000535897 CDX2Q99626 313 aaPredicted RBP9.77□□□□□ -0.85
CHFR-211ENST00000535897 MOV10L1Q9BXT6 1211 aaKnown RBP9.77□□□□□ -0.85
CHFR-211ENST00000535897 HOXC10Q9NYD6 342 aa9.77□□□□□ -0.85
CHFR-211ENST00000535897 RLFQ13129 1914 aa9.77□□□□□ -0.85
CHFR-211ENST00000535897 ZNF236Q9UL36 1845 aa9.77□□□□□ -0.85
CHFR-211ENST00000535897 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 SEPT4O43236 478 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 STRNO43815 780 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 ERCC3P19447 782 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 PLCD1P51178 756 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 ATP8B2P98198 1209 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 C9orf50Q5SZB4 431 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 ZKSCAN2Q63HK3 967 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 OLFML2BQ68BL8 750 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 NCAPG2Q86XI2 1143 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 FTSJ3Q8IY81 847 aaKnown RBP9.76□□□□□ -0.85
CHFR-211ENST00000535897 MYLIPQ8WY64 445 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 EAF2Q96CJ1 260 aaPredicted RBP9.76□□□□□ -0.85
CHFR-211ENST00000535897 SPATC1LQ9H0A9 340 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 MCM9Q9NXL9 1143 aa9.76□□□□□ -0.85
CHFR-211ENST00000535897 PRUNE2Q8WUY3 3088 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 FLOT1O75955 427 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 FOSL2P15408 326 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 PRAMEF19Q5SWL8 479 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 AACSQ86V21 672 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 SPICE1Q8N0Z3 855 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 CRNKL1Q9BZJ0 848 aaKnown RBP9.75□□□□□ -0.85
CHFR-211ENST00000535897 BCL11AQ9H165 835 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 MROH8Q9H579 483 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 MYH8P13535 1937 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 A0A0G2JMZ2 1700 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 TTC28Q96AY4 2481 aa9.75□□□□□ -0.85
CHFR-211ENST00000535897 A0A1W2PRG0 241 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 COBLO75128 1261 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 RARBP10826 455 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 FCER1AP12319 257 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 GUCY1A2P33402 732 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 SMAD3P84022 425 aaKnown RBP9.74□□□□□ -0.85
CHFR-211ENST00000535897 TLE2Q04725 743 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 FAM47AQ5JRC9 791 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 MB21D1Q8N884 522 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 SHCBP1Q8NEM2 672 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 MAML3Q96JK9 1138 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 RNPC3Q96LT9 517 aaKnown RBP9.74□□□□□ -0.85
CHFR-211ENST00000535897 RIOK1Q9BRS2 568 aaKnown RBP9.74□□□□□ -0.85
CHFR-211ENST00000535897 SH2D4AQ9H788 454 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 ARHGEF10LQ9HCE6 1279 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 XPNPEP3Q9NQH7 507 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 PDLIM7Q9NR12 457 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
CHFR-211ENST00000535897 TRIM43BA6NCK2 446 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 RAD21O60216 631 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 PQBP1O60828 265 aaKnown RBP9.73□□□□□ -0.85
CHFR-211ENST00000535897 RAG1P15918 1043 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 SNX17Q15036 470 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 LRRC41Q15345 812 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 TTF1Q15361 905 aaPredicted RBP9.73□□□□□ -0.85
CHFR-211ENST00000535897 TMED8Q6PL24 325 aaPredicted RBP9.73□□□□□ -0.85
CHFR-211ENST00000535897 TMEM179Q6ZVK1 233 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 RNF180Q86T96 592 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 ERC1Q8IUD2 1116 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 CLEC10AQ8IUN9 316 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 SDR42E1Q8WUS8 393 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 TRIM43Q96BQ3 446 aaPredicted RBP9.73□□□□□ -0.85
CHFR-211ENST00000535897 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 TTYH1Q9H313 450 aaPredicted RBP9.73□□□□□ -0.85
CHFR-211ENST00000535897 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
CHFR-211ENST00000535897 NOP58Q9Y2X3 529 aaKnown RBP9.73□□□□□ -0.85
CHFR-211ENST00000535897 SPTBN5Q9NRC6 3674 aaKnown RBP9.72□□□□□ -0.85
CHFR-211ENST00000535897 APBB1O00213 710 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 CLTBP09497 229 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 CYP2D6P10635 497 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 PDE6AP16499 860 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 DSG3P32926 999 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 EVX2Q03828 476 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 ICA1Q05084 483 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 GABPAQ06546 454 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 KCTD2Q14681 263 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 AMOTL1Q8IY63 956 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 ABRAQ8N0Z2 381 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 SLC44A5Q8NCS7 719 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 MMP19Q99542 508 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 DNAJC2Q99543 621 aaKnown RBP9.72□□□□□ -0.85
CHFR-211ENST00000535897 IL1RAPL2Q9NP60 686 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 TACC3Q9Y6A5 838 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 ZNF532Q9HCE3 1301 aa9.72□□□□□ -0.85
CHFR-211ENST00000535897 COL11A1P12107 1806 aaPredicted RBP9.71□□□□□ -0.85
CHFR-211ENST00000535897 PLXNA1Q9UIW2 1896 aa9.71□□□□□ -0.85
CHFR-211ENST00000535897 GOLIM4O00461 696 aa9.71□□□□□ -0.86
CHFR-211ENST00000535897 PGK1P00558 417 aa9.71□□□□□ -0.86
CHFR-211ENST00000535897 IGHA2P01877 340 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms