RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CATSPERGQ6ZRH7 1159 aa12.99□□□□□ -0.33
CCDC60-202ENST00000535685 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
CCDC60-202ENST00000535685 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
CCDC60-202ENST00000535685 SHISA4Q96DD7 197 aa12.99□□□□□ -0.33
CCDC60-202ENST00000535685 CCDC17Q96LX7 622 aa12.99□□□□□ -0.33
CCDC60-202ENST00000535685 PUS7LQ9H0K6 701 aaKnown RBP12.99□□□□□ -0.33
CCDC60-202ENST00000535685 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
CCDC60-202ENST00000535685 GALR2O43603 387 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-202ENST00000535685 PRKAB2O43741 272 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 XRCC5P13010 732 aaKnown RBP12.98□□□□□ -0.33
CCDC60-202ENST00000535685 MAPK4P31152 587 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 ERVK-24P63145 666 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 SEPT2Q15019 361 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
CCDC60-202ENST00000535685 FEZ1Q99689 392 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 RNF208Q9H0X6 261 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 TXNRD2Q9NNW7 524 aa12.98□□□□□ -0.33
CCDC60-202ENST00000535685 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-202ENST00000535685 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
CCDC60-202ENST00000535685 USP17L12C9JPN9 530 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 USP17L21D6R901 530 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 ERC2O15083 957 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 CHGBP05060 677 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 INHAP05111 366 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 CYP2D6P10635 497 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 VCAM1P19320 739 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 EVX2Q03828 476 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
CCDC60-202ENST00000535685 Q3C1V9 767 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 AMOTL1Q8IY63 956 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 SOCS4Q8WXH5 440 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 APPBP2Q92624 585 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 USP6NLQ92738 828 aa12.97□□□□□ -0.33
CCDC60-202ENST00000535685 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
CCDC60-202ENST00000535685 SALL3Q9BXA9 1300 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 A0A1W2PRG0 241 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 HAX1O00165 279 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 RNF113AO15541 343 aaKnown RBP12.96□□□□□ -0.33
CCDC60-202ENST00000535685 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
CCDC60-202ENST00000535685 SGPL1O95470 568 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 HMGCRP04035 888 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 ELNP15502 786 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 CDK8P49336 464 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.33
CCDC60-202ENST00000535685 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 SIAH1Q8IUQ4 282 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
CCDC60-202ENST00000535685 SLC44A5Q8NCS7 719 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 PI4K2BQ8TCG2 481 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 U2AF1L4Q8WU68 220 aaKnown RBP12.96□□□□□ -0.33
CCDC60-202ENST00000535685 LPAR1Q92633 364 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.33
CCDC60-202ENST00000535685 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
CCDC60-202ENST00000535685 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.34
CCDC60-202ENST00000535685 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 CNMDO75829 334 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 SLC34A2O95436 690 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 MYCP01106 439 aaPredicted RBP12.95□□□□□ -0.34
CCDC60-202ENST00000535685 GNAT2P19087 354 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 CCNA1P78396 465 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 MORN1Q5T089 497 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 MAP3K21Q5TCX8 1036 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 SH2D4AQ9H788 454 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 HOXC10Q9NYD6 342 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 TMX2Q9Y320 296 aa12.95□□□□□ -0.34
CCDC60-202ENST00000535685 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 SPDYE16A6NNV3 312 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-202ENST00000535685 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
CCDC60-202ENST00000535685 AKR1B1P15121 316 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 COG2Q14746 738 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 ZYXQ15942 572 aaKnown RBP12.94□□□□□ -0.34
CCDC60-202ENST00000535685 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 PORCNQ9H237 461 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 RPAP3Q9H6T3 665 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-202ENST00000535685 KANSL2Q9H9L4 492 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 ZNF236Q9UL36 1845 aa12.94□□□□□ -0.34
CCDC60-202ENST00000535685 RPTORQ8N122 1335 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 COL11A1P12107 1806 aaPredicted RBP12.93□□□□□ -0.34
CCDC60-202ENST00000535685 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
CCDC60-202ENST00000535685 MX1P20591 662 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms