RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TRIML1Q8N9V2 468 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 ZBTB38Q8NAP3 1195 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-232ENST00000535094 NAA15Q9BXJ9 866 aaKnown RBP17.89■□□□□ 0.45
MCF2L-232ENST00000535094 NBPF3Q9H094 633 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 FOXP1Q9H334 677 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-232ENST00000535094 ANKZF1Q9H8Y5 726 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 CCDC194A0A1B0GVG4 234 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 SMIM22K7EJ46 135 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 RAD21O60216 631 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 AKR1B10O60218 316 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 CXCR5P32302 372 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 LIG3P49916 1009 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 SPAG1Q07617 926 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 RASGRF1Q13972 1273 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 BEND6Q5SZJ8 279 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-232ENST00000535094 CPDO75976 1380 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
MCF2L-232ENST00000535094 KRT86O43790 486 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 GYPCP04921 128 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 SSBP05455 408 aaKnown RBP eCLIP17.88■□□□□ 0.45
MCF2L-232ENST00000535094 CTSWP56202 376 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 PUM3Q15397 648 aaKnown RBP17.88■□□□□ 0.45
MCF2L-232ENST00000535094 E2F4Q16254 413 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 JAKMIP2Q96AA8 810 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 VAT1LQ9HCJ6 419 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 A0A1B0GTH6 734 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 TSPY2A6NKD2 308 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 NTRK3Q16288 839 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 TDRD12Q587J7 1177 aaKnown RBP17.88■□□□□ 0.45
MCF2L-232ENST00000535094 MMRN2Q9H8L6 949 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 SRLQ86TD4 932 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 OR8K1Q8NGG5 319 aa17.88■□□□□ 0.45
MCF2L-232ENST00000535094 EPB41L4AQ9HCS5 686 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-232ENST00000535094 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-232ENST00000535094 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 CCT5P48643 541 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 ARID5AQ03989 594 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 WHAMMP3Q1A5X7 153 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 IPO4Q8TEX9 1081 aaKnown RBP17.87■□□□□ 0.45
MCF2L-232ENST00000535094 CCDC42Q96M95 316 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
MCF2L-232ENST00000535094 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-232ENST00000535094 PCCAP05165 728 aaPredicted RBP17.87■□□□□ 0.45
MCF2L-232ENST00000535094 PPARAQ07869 468 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 KIF5AQ12840 1032 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 UIMC1Q96RL1 719 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 ABHD10Q9NUJ1 306 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 NWD1Q149M9 1564 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 MAGEB6P1A0A0J9YX57 407 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 GOLGA6CA6NDK9 693 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 ACTN4O43707 911 aaKnown RBP17.87■□□□□ 0.45
MCF2L-232ENST00000535094 GOLGA6DP0CG33 693 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 MNAT1P51948 309 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 FAM76AQ8TAV0 307 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 IFT81Q8WYA0 676 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 GOLGA6AQ9NYA3 693 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 AGLP35573 1532 aa17.87■□□□□ 0.45
MCF2L-232ENST00000535094 ZNF18P17022 549 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 CYLC1P35663 651 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-232ENST00000535094 LIFRP42702 1097 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 C2orf54Q08AI8 447 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 TBX2Q13207 712 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-232ENST00000535094 LPIN2Q92539 896 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 GPKOWQ92917 476 aaPredicted RBP eCLIP17.86■□□□□ 0.45
MCF2L-232ENST00000535094 A0A087X0B3 334 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 SHTN1A0MZ66 631 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 B4DLN1 442 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 ZNF185O15231 689 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 SLC7A5Q01650 507 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 PSMA7O14818 248 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 NDUFA10O95299 355 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 ASIC1P78348 528 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 EARS2Q5JPH6 523 aaKnown RBP17.86■□□□□ 0.45
MCF2L-232ENST00000535094 RNF187Q5TA31 235 aaPredicted RBP17.86■□□□□ 0.45
MCF2L-232ENST00000535094 DZIP3Q86Y13 1208 aaKnown RBP17.86■□□□□ 0.45
MCF2L-232ENST00000535094 CSGALNACT2Q8N6G5 542 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 FAM71BQ8TC56 605 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 ZHX3Q9H4I2 956 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 FAM53CQ9NYF3 392 aa17.86■□□□□ 0.45
MCF2L-232ENST00000535094 GOLGA6BA6NDN3 693 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 LRRIQ3A6PVS8 624 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-232ENST00000535094 EIF3CLB5ME19 914 aaKnown RBP17.85■□□□□ 0.45
MCF2L-232ENST00000535094 EIF3CQ99613 913 aaKnown RBP17.85■□□□□ 0.45
MCF2L-232ENST00000535094 SAMM50Q9Y512 469 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 SOS2Q07890 1332 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-232ENST00000535094 ATP1A2P50993 1020 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 ERVK-24P63145 666 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 PTPROQ16827 1216 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 KCTD16Q68DU8 428 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 GSDMAQ96QA5 445 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 FAM207AQ9NSI2 230 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-232ENST00000535094 TTC26A0AVF1 554 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 GSG1L2A8MUP6 293 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 ATP1A1P05023 1023 aaKnown RBP17.85■□□□□ 0.45
MCF2L-232ENST00000535094 LRP10Q7Z4F1 713 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 HEATR3Q7Z4Q2 680 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 STX8Q9UNK0 236 aa17.85■□□□□ 0.45
MCF2L-232ENST00000535094 EBAG9O00559 213 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms