RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CTCFLQ8NI51 663 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 USP33Q8TEY7 942 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 FRS2Q8WU20 508 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 LZICQ8WZA0 190 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 UBXN4Q92575 508 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 EZH1Q92800 747 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 KCNN1Q92952 543 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 SNX21Q969T3 373 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 PPP1R14BQ96C90 147 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 LUC7LQ9NQ29 371 aaKnown RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 MAP3K20Q9NYL2 800 aaKnown RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 ZFATQ9P243 1243 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 KLHL42Q9P2K6 505 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 RABL2AQ9UBK7 228 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-201ENST00000535076 FAN1Q9Y2M0 1017 aa5.95□□□□□ -1.46
SNHG1-201ENST00000535076 ROCK1Q13464 1354 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 MYOM3Q5VTT5 1437 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 NCOA3Q9Y6Q9 1424 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 SMTNL1A8MU46 457 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 EIF3CLB5ME19 914 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 TNFRSF10BO14763 440 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 MYO1BO43795 1136 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 AHCYL1O43865 530 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 KDM1AO60341 852 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 MICAL2O94851 1124 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 KIAA0754O94854 1291 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 IDO1P14902 403 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 TRIM21P19474 475 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 ACTN2P35609 894 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 SH3BGRP55822 239 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 FXNQ16595 210 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 INF2Q27J81 1249 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 KIF4BQ2VIQ3 1234 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 CCDC144BQ3MJ40 725 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 CCDC122Q5T0U0 273 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 EFCAB2Q5VUJ9 269 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 CCDC144CPQ8IYA2 1237 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 AFAP1Q8N556 730 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 ATP11CQ8NB49 1132 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 RETREG2Q8NC44 543 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 BICD2Q8TD16 824 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 ZFAND2BQ8WV99 257 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 TEKT4Q8WW24 435 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 RTF1Q92541 710 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 SAAL1Q96ER3 474 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 TTC14Q96N46 770 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 GSDMAQ96QA5 445 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 EIF3CQ99613 913 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 DUSP9Q99956 384 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 SH3GL1Q99961 368 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 LRRCC1Q9C099 1032 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 GINM1Q9NU53 330 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 C6orf203Q9P0P8 240 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 MAFFQ9ULX9 164 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 MYO6Q9UM54 1294 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 LZTS1Q9Y250 596 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 N6AMT1Q9Y5N5 214 aa5.94□□□□□ -1.46
SNHG1-201ENST00000535076 LRRFIP2Q9Y608 721 aaKnown RBP5.94□□□□□ -1.46
SNHG1-201ENST00000535076 RPAP1Q9BWH6 1393 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 M0R082 166 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 P4HA2O15460 535 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 PARNO95453 639 aaKnown RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 FESP07332 822 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 VIL1P09327 827 aaKnown RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 NFKB1P19838 968 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 CCNCP24863 283 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 CHRNA4P43681 627 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 ZBED6P86452 979 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 PDE4BQ07343 736 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 WASHC5Q12768 1159 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 TRIM29Q14134 588 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 SUZ12Q15022 739 aaKnown RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 SWI5Q1ZZU3 235 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 CCDC152Q4G0S7 254 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 RRP12Q5JTH9 1297 aaKnown RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 WLSQ5T9L3 541 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 CEP135Q66GS9 1140 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 ZNF662Q6ZS27 426 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 BRAPQ7Z569 592 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 TADA2BQ86TJ2 420 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 WDR63Q8IWG1 891 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 ETFBKMTQ8IXQ9 262 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 MAB21L3Q8N8X9 362 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 ZNF417Q8TAU3 575 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 MAGEC3Q8TD91 643 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 ZNF587Q96SQ5 575 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 OSBPL9Q96SU4 736 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 NAP1L3Q99457 506 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 MKNK1Q9BUB5 465 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 PLVAPQ9BX97 442 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 UBXN6Q9BZV1 441 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 BRD8Q9H0E9 1235 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 CXXC1Q9P0U4 656 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 DDX25Q9UHL0 483 aaKnown RBP5.93□□□□□ -1.46
SNHG1-201ENST00000535076 TMCC3Q9ULS5 477 aa5.93□□□□□ -1.46
SNHG1-201ENST00000535076 AKNAQ7Z591 1439 aa5.92□□□□□ -1.46
SNHG1-201ENST00000535076 CEP164Q9UPV0 1460 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms