RNA–Protein interactions for RNA: ENST00000535041.5

LRTM2-202, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM2, Length 3,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-202ENST00000535041 POLLQ9UGP5 575 aa14.08□□□□□ -0.16
LRTM2-202ENST00000535041 CCDC66A2RUB6 948 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 RBM5P52756 815 aaKnown RBP eCLIP14.07□□□□□ -0.16
LRTM2-202ENST00000535041 CACNB3P54284 484 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 DDR1Q08345 913 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 PTGDRQ13258 359 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 TERF2Q15554 542 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 RESP18Q5W5W9 173 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
LRTM2-202ENST00000535041 TMTC3Q6ZXV5 915 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 DPF2Q92785 391 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 ARPP21Q9UBL0 812 aaPredicted RBP14.07□□□□□ -0.16
LRTM2-202ENST00000535041 MYH13Q9UKX3 1938 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 PPP6R2O75170 966 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 USP17L2Q6R6M4 530 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 DDX60Q8IY21 1712 aaKnown RBP14.07□□□□□ -0.16
LRTM2-202ENST00000535041 MPHOSPH10O00566 681 aaKnown RBP14.07□□□□□ -0.16
LRTM2-202ENST00000535041 UBASH3AP57075 661 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 FANCCQ00597 558 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 POSTNQ15063 836 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 TTC38Q5R3I4 469 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 KRT27Q7Z3Y8 459 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 SMARCE1Q969G3 411 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 EEF2KMTQ96G04 330 aa14.07□□□□□ -0.16
LRTM2-202ENST00000535041 FOXP1Q9H334 677 aaPredicted RBP14.07□□□□□ -0.16
LRTM2-202ENST00000535041 FAM196BA6NMK8 535 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 PES1O00541 588 aaKnown RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 SEMA3EO15041 775 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 SYMPKQ92797 1274 aaKnown RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 FRMPD2Q68DX3 1309 aaPredicted RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 CTIFO43310 598 aaKnown RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 SCG2P13521 617 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 TCP10Q12799 353 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 CPLX3Q8WVH0 158 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 LEMD3Q9Y2U8 911 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
LRTM2-202ENST00000535041 STK36Q9NRP7 1315 aa14.06□□□□□ -0.16
LRTM2-202ENST00000535041 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 APBA3O96018 575 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 TPM3P06753 285 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 LRRC8AQ8IWT6 810 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
LRTM2-202ENST00000535041 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
LRTM2-202ENST00000535041 CAVIN2O95810 425 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 PTPREP23469 700 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 TXNRD1Q16881 649 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 C12orf60Q5U649 245 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 EYA3Q99504 573 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 DBNDD1Q9H9R9 158 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 CEP131Q9UPN4 1083 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 NRAPQ86VF7 1730 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 LDHCP07864 332 aa14.05□□□□□ -0.16
LRTM2-202ENST00000535041 GABPB1Q06547 395 aaPredicted RBP14.05□□□□□ -0.16
LRTM2-202ENST00000535041 ZC3H12CQ9C0D7 883 aaKnown RBP14.05□□□□□ -0.16
LRTM2-202ENST00000535041 A0A087X0B3 334 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 SMTNL1A8MU46 457 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 PRPF3O43395 683 aaKnown RBP14.04□□□□□ -0.16
LRTM2-202ENST00000535041 KIF5BP33176 963 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 INF2Q27J81 1249 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 ZSCAN29Q8IWY8 852 aaPredicted RBP14.04□□□□□ -0.16
LRTM2-202ENST00000535041 KRT222Q8N1A0 295 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 KIF18AQ8NI77 898 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 RBM28Q9NW13 759 aaKnown RBP14.04□□□□□ -0.16
LRTM2-202ENST00000535041 HOOK1Q9UJC3 728 aaKnown RBP14.04□□□□□ -0.16
LRTM2-202ENST00000535041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
LRTM2-202ENST00000535041 CNTNAP5Q8WYK1 1306 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 CALM1P0DP23 149 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 CALM2P0DP24 149 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 CALM3P0DP25 149 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 SFPQP23246 707 aaKnown RBP eCLIP14.04□□□□□ -0.16
LRTM2-202ENST00000535041 MYL5Q02045 173 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 TBC1D16Q8TBP0 767 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 MAN1B1Q9UKM7 699 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 NFE2L3Q9Y4A8 694 aa14.04□□□□□ -0.16
LRTM2-202ENST00000535041 CAPN2P17655 700 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 BMP6P22004 513 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
LRTM2-202ENST00000535041 GPCPD1Q9NPB8 672 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 TTF2Q9UNY4 1162 aaKnown RBP14.03□□□□□ -0.16
LRTM2-202ENST00000535041 HPSEQ9Y251 543 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 GSTO1P78417 241 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 FMR1Q06787 632 aaKnown RBP eCLIP14.03□□□□□ -0.16
LRTM2-202ENST00000535041 FUT2Q10981 343 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 KIAA0825Q8IV33 1275 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 TMEM47Q9BQJ4 181 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
LRTM2-202ENST00000535041 KCNQ5Q9NR82 932 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
LRTM2-202ENST00000535041 CDK8P49336 464 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 TYW1BQ6NUM6 668 aa14.03□□□□□ -0.16
LRTM2-202ENST00000535041 KLRF2D3W0D1 207 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms