RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 DNM1Q05193 864 aaKnown RBP23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 CLIP2Q9UDT6 1046 aa23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 CNTNAP5Q8WYK1 1306 aa23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 hCG_1642624A0A1W2PR95 340 aa23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 EPS15P42566 896 aa23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 JAG1P78504 1218 aa23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 GDPD2Q9HCC8 539 aa23.6■■□□□ 1.37
TNFRSF1A-205ENST00000534885 DEXIO95424 95 aa23.59■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TNNI2P48788 182 aa23.59■■□□□ 1.37
TNFRSF1A-205ENST00000534885 CNPY2Q9Y2B0 182 aa23.59■■□□□ 1.37
TNFRSF1A-205ENST00000534885 TNFAIP1Q13829 316 aa23.58■■□□□ 1.37
TNFRSF1A-205ENST00000534885 ABCB5Q2M3G0 1257 aa23.58■■□□□ 1.37
TNFRSF1A-205ENST00000534885 MIGA2Q7L4E1 593 aa23.58■■□□□ 1.37
TNFRSF1A-205ENST00000534885 V9GY48 417 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF1A-205ENST00000534885 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.36
TNFRSF1A-205ENST00000534885 ATP2B2Q01814 1243 aa23.58■■□□□ 1.36
TNFRSF1A-205ENST00000534885 SEPT2Q15019 361 aa23.58■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PKN1Q16512 942 aa23.58■■□□□ 1.36
TNFRSF1A-205ENST00000534885 GPR162Q16538 588 aa23.58■■□□□ 1.36
TNFRSF1A-205ENST00000534885 ZSCAN16Q9H4T2 348 aaPredicted RBP23.58■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PRPF3O43395 683 aaKnown RBP23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 KRT40Q6A162 431 aa23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 USP17L2Q6R6M4 530 aa23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 TMEM179Q6ZVK1 233 aa23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 WASF1Q92558 559 aa23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 TEPSINQ96N21 525 aa23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 LMBRD1Q9NUN5 540 aa23.57■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PALM3A6NDB9 673 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PRPF40AO75400 957 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 GH2P01242 217 aa23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 NCLP19338 710 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 AKAP17AQ02040 695 aaKnown RBP23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 MYH15Q9Y2K3 1946 aa23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PDHBP11177 359 aa23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 SLC35G1Q2M3R5 365 aa23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 KANSL2Q9H9L4 492 aa23.56■■□□□ 1.36
TNFRSF1A-205ENST00000534885 USP17L5A8MUK1 530 aa23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 TBC1D12O60347 775 aa23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 EEF2P13639 858 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 HIRAP54198 1017 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PIBF1Q8WXW3 757 aa23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PARP1P09874 1014 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 ANGEL2Q5VTE6 544 aaKnown RBP23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 SIAH1Q8IUQ4 282 aa23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 DEFB129Q9H1M3 183 aa23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 CPVLQ9H3G5 476 aa23.55■■□□□ 1.36
TNFRSF1A-205ENST00000534885 KIF28PB7ZC32 967 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 KLRF2D3W0D1 207 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 FIBPO43427 364 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 CYTH3O43739 400 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 GNAQP50148 359 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 ICA1Q05084 483 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 TRIM29Q14134 588 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 SHISA4Q96DD7 197 aa23.54■■□□□ 1.36
TNFRSF1A-205ENST00000534885 TRAK2O60296 914 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 KIF23Q02241 960 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 RGS22Q8NE09 1264 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 NYAP2Q9P242 653 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 SNHG28P0DPA3 235 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 MAP3K10Q02779 954 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PPP4R3BQ5MIZ7 849 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 USP48Q86UV5 1035 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 CABP5Q9NP86 173 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 GGA3Q9NZ52 723 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 KCNJ14Q9UNX9 436 aa23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 FRMPD2Q68DX3 1309 aaPredicted RBP23.53■■□□□ 1.36
TNFRSF1A-205ENST00000534885 VEGFAP15692 232 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF1A-205ENST00000534885 VPS54Q9P1Q0 977 aa23.52■■□□□ 1.36
TNFRSF1A-205ENST00000534885 TFIP11Q9UBB9 837 aaKnown RBP23.52■■□□□ 1.36
TNFRSF1A-205ENST00000534885 PTMSP20962 102 aa23.52■■□□□ 1.35
TNFRSF1A-205ENST00000534885 KRT85P78386 507 aa23.52■■□□□ 1.35
TNFRSF1A-205ENST00000534885 MKL1Q969V6 931 aa23.52■■□□□ 1.35
TNFRSF1A-205ENST00000534885 POLR2AP24928 1970 aaKnown RBP23.51■■□□□ 1.35
TNFRSF1A-205ENST00000534885 ZBTB21Q9ULJ3 1066 aa23.51■■□□□ 1.35
TNFRSF1A-205ENST00000534885 MMP1P03956 469 aa23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 LMOD1P29536 600 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 APOBEC3FQ8IUX4 373 aaKnown RBP23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 TMEM87AQ8NBN3 555 aa23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 SCG2P13521 617 aa23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 PFKFB3Q16875 520 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 NBPF12Q5TAG4 269 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 LZTS2Q9BRK4 669 aa23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 SPZ1Q9BXG8 430 aa23.5■■□□□ 1.35
TNFRSF1A-205ENST00000534885 CAP2P40123 477 aa23.49■■□□□ 1.35
TNFRSF1A-205ENST00000534885 ASPRV1Q53RT3 343 aa23.49■■□□□ 1.35
TNFRSF1A-205ENST00000534885 PRAMEF18Q5VWM3 479 aa23.49■■□□□ 1.35
TNFRSF1A-205ENST00000534885 FTOQ9C0B1 505 aaKnown RBP eCLIP23.49■■□□□ 1.35
TNFRSF1A-205ENST00000534885 UBA5Q9GZZ9 404 aa23.49■■□□□ 1.35
TNFRSF1A-205ENST00000534885 ATAD5Q96QE3 1844 aa23.49■■□□□ 1.35
TNFRSF1A-205ENST00000534885 PHF20L1A8MW92 1017 aa23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 RAD21O60216 631 aa23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 ZNF543Q08ER8 600 aa23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 GPCPD1Q9NPB8 672 aa23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 ADARB2Q9NS39 739 aaKnown RBP23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 A0A1W2PRG0 241 aa23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 GADD45BO75293 160 aaPredicted RBP23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 BRAPQ7Z569 592 aa23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 RBM27Q9P2N5 1060 aaKnown RBP23.48■■□□□ 1.35
TNFRSF1A-205ENST00000534885 BTBD18B2RXH4 712 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms