RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CTDSPL2Q05D32 466 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 SKIDA1Q1XH10 827 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 WLSQ5T9L3 541 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 WDR93Q6P2C0 686 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 CAPN7Q9Y6W3 813 aa21.64■■□□□ 1.05
SMPD1-210ENST00000534405 SLC3A2P08195 630 aaKnown RBP21.63■■□□□ 1.05
SMPD1-210ENST00000534405 PAX7P23759 505 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 CMA1P23946 247 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 IL6STP40189 918 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-210ENST00000534405 IRAK1P51617 712 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 NAIF1Q69YI7 327 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-210ENST00000534405 MAGEB6Q8N7X4 407 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 SEC31BQ9NQW1 1179 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 MBD4O95243 580 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 SUSD4Q5VX71 490 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 IFNL3Q8IZI9 196 aa21.63■■□□□ 1.05
SMPD1-210ENST00000534405 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-210ENST00000534405 ZBTB43O43298 467 aa21.62■■□□□ 1.05
SMPD1-210ENST00000534405 TBX2Q13207 712 aaPredicted RBP21.62■■□□□ 1.05
SMPD1-210ENST00000534405 FAM43BQ6ZT52 329 aaPredicted RBP21.62■■□□□ 1.05
SMPD1-210ENST00000534405 TMEM87BQ96K49 555 aa21.62■■□□□ 1.05
SMPD1-210ENST00000534405 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
SMPD1-210ENST00000534405 ZSWIM5Q9P217 1185 aa21.62■■□□□ 1.05
SMPD1-210ENST00000534405 MROH5Q6ZUA9 1318 aa21.62■■□□□ 1.05
SMPD1-210ENST00000534405 PTPAQ15257 358 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 ALX1Q15699 326 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 TMEM67Q5HYA8 995 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 SGMS1Q86VZ5 419 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 KAT14Q9H8E8 782 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 ARAP2Q8WZ64 1704 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 PRKAB2O43741 272 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 SERPINC1P01008 464 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 RHOXF2BP0C7M4 288 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 CFAP100Q494V2 611 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 NFXL1Q6ZNB6 911 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 RHOXF2Q9BQY4 288 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 CD248Q9HCU0 757 aa21.61■■□□□ 1.05
SMPD1-210ENST00000534405 ANKRD33BA6NCL7 494 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 GOLGA8AA7E2F4 631 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 CDKL5O76039 1030 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 SHC4Q6S5L8 630 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 MAP3K14Q99558 947 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 ODF2LQ9ULJ1 636 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 ZC3H4Q9UPT8 1303 aaKnown RBP21.6■■□□□ 1.05
SMPD1-210ENST00000534405 MYO1BO43795 1136 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 KARSQ15046 597 aaKnown RBP21.6■■□□□ 1.05
SMPD1-210ENST00000534405 KIF4BQ2VIQ3 1234 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 NAPBQ9H115 298 aa21.6■■□□□ 1.05
SMPD1-210ENST00000534405 SHTN1A0MZ66 631 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 GSG1L2A8MUP6 293 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 MYO1FO00160 1098 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 SLC5A1P13866 664 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 IARSP41252 1262 aaKnown RBP21.59■■□□□ 1.05
SMPD1-210ENST00000534405 SEMA3FQ13275 785 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 TRIM6Q9C030 488 aaPredicted RBP21.59■■□□□ 1.05
SMPD1-210ENST00000534405 HPCAL4Q9UM19 191 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 HPSEQ9Y251 543 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 SH3BP1Q9Y3L3 701 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 DOCK2Q92608 1830 aa21.59■■□□□ 1.05
SMPD1-210ENST00000534405 MRPL44Q9H9J2 332 aaKnown RBP21.59■■□□□ 1.05
SMPD1-210ENST00000534405 TMEM232C9JQI7 657 aa21.58■■□□□ 1.05
SMPD1-210ENST00000534405 RTN2O75298 545 aa21.58■■□□□ 1.05
SMPD1-210ENST00000534405 FAM76AQ8TAV0 307 aa21.58■■□□□ 1.05
SMPD1-210ENST00000534405 BCAS4Q8TDM0 211 aa21.58■■□□□ 1.05
SMPD1-210ENST00000534405 SLC24A3Q9HC58 644 aa21.58■■□□□ 1.05
SMPD1-210ENST00000534405 IFIT3O14879 490 aaKnown RBP21.58■■□□□ 1.04
SMPD1-210ENST00000534405 SYKP43405 635 aa21.58■■□□□ 1.04
SMPD1-210ENST00000534405 BCAMP50895 628 aa21.58■■□□□ 1.04
SMPD1-210ENST00000534405 MAP3K12Q12852 859 aa21.58■■□□□ 1.04
SMPD1-210ENST00000534405 INTS5Q6P9B9 1019 aaKnown RBP21.58■■□□□ 1.04
SMPD1-210ENST00000534405 LCORLQ8N3X6 602 aa21.58■■□□□ 1.04
SMPD1-210ENST00000534405 CHD4Q14839 1912 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 EIF3HO15372 352 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMPD1-210ENST00000534405 PPP6R2O75170 966 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 GUCY1A2P33402 732 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 LIFRP42702 1097 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 GRIK3Q13003 919 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 PPFIA1Q13136 1202 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 TTC19Q6DKK2 380 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-210ENST00000534405 IQCA1Q86XH1 822 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 TC2NQ8N9U0 490 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMPD1-210ENST00000534405 SLC26A6Q9BXS9 759 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 IRX2Q9BZI1 471 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-210ENST00000534405 TBC1D8BQ0IIM8 1120 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 ZKSCAN3Q9BRR0 538 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 SLC12A7Q9Y666 1083 aa21.57■■□□□ 1.04
SMPD1-210ENST00000534405 CTAGE15A4D2H0 777 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 CTAGE8P0CG41 777 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 ZKSCAN8Q15776 578 aaPredicted RBP21.56■■□□□ 1.04
SMPD1-210ENST00000534405 WHAMMP3Q1A5X7 153 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 AKNAD1Q5T1N1 836 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 CTAGE6Q86UF2 777 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 CTAGE4Q8IX94 777 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 STK11IPQ8N1F8 1099 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 GRIN2DO15399 1336 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 CCDC175P0C221 793 aa21.56■■□□□ 1.04
SMPD1-210ENST00000534405 SSR1P43307 286 aaKnown RBP21.56■■□□□ 1.04
SMPD1-210ENST00000534405 MYL5Q02045 173 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms