RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	LHX8	Q68G74	356 aa		29.23	■■■□□ 2.27
RELA-223	ENST00000534283	HOXC10	Q9NYD6	342 aa		29.23	■■■□□ 2.27
RELA-223	ENST00000534283	IGHA2	P01877	340 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	HOXC6	P09630	235 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	C16orf86	Q6ZW13	317 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	CLEC10A	Q8IUN9	316 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	CCDC17	Q96LX7	622 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	NBPF3	Q9H094	633 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	FLRT1	Q9NZU1	646 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	TMX2	Q9Y320	296 aa		29.22	■■■□□ 2.27
RELA-223	ENST00000534283	GLRX3	O76003	335 aa	Known RBP	29.21	■■■□□ 2.27
RELA-223	ENST00000534283	CCND3	P30281	292 aa	Predicted RBP	29.21	■■■□□ 2.27
RELA-223	ENST00000534283	GRB14	Q14449	540 aa		29.21	■■■□□ 2.27
RELA-223	ENST00000534283	ZSCAN25	Q6NSZ9	544 aa		29.21	■■■□□ 2.27
RELA-223	ENST00000534283	CTR9	Q6PD62	1173 aa		29.21	■■■□□ 2.27
RELA-223	ENST00000534283	SLC4A4	Q9Y6R1	1079 aa		29.21	■■■□□ 2.27
RELA-223	ENST00000534283	STRBP	Q96SI9	672 aa	Known RBP	29.2	■■■□□ 2.26
RELA-223	ENST00000534283	LPAR1	Q92633	364 aa		29.19	■■■□□ 2.26
RELA-223	ENST00000534283	MOV10L1	Q9BXT6	1211 aa	Known RBP	29.19	■■■□□ 2.26
RELA-223	ENST00000534283	TRIOBP	Q9H2D6	2365 aa		29.19	■■■□□ 2.26
RELA-223	ENST00000534283	ICA1	Q05084	483 aa		29.18	■■■□□ 2.26
RELA-223	ENST00000534283	NPLOC4	Q8TAT6	608 aa		29.18	■■■□□ 2.26
RELA-223	ENST00000534283	C11orf49	Q9H6J7	331 aa		29.18	■■■□□ 2.26
RELA-223	ENST00000534283	VCPKMT	Q9H867	229 aa		29.18	■■■□□ 2.26
RELA-223	ENST00000534283	CWC22	Q9HCG8	908 aa	Known RBP	29.18	■■■□□ 2.26
RELA-223	ENST00000534283	NAV1	Q8NEY1	1877 aa		29.18	■■■□□ 2.26
RELA-223	ENST00000534283	COL6A1	P12109	1028 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	DSG3	P32926	999 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	WDR78	Q5VTH9	848 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	KBTBD3	Q8NAB2	608 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	29.17	■■■□□ 2.26
RELA-223	ENST00000534283	TANGO6	Q9C0B7	1094 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	SPATC1L	Q9H0A9	340 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	ARHGEF10L	Q9HCE6	1279 aa		29.17	■■■□□ 2.26
RELA-223	ENST00000534283	TSHZ3	Q63HK5	1081 aa		29.16	■■■□□ 2.26
RELA-223	ENST00000534283	OSBP2	Q969R2	916 aa		29.16	■■■□□ 2.26
RELA-223	ENST00000534283	PFAS	O15067	1338 aa		29.16	■■■□□ 2.26
RELA-223	ENST00000534283	GSG1L2	A8MUP6	293 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	SBK1	Q52WX2	424 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	MFSD14C	Q5VZR4	134 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	AMOTL1	Q8IY63	956 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	SPICE1	Q8N0Z3	855 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	SHCBP1	Q8NEM2	672 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	DDRGK1	Q96HY6	314 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	PCDHB15	Q9Y5E8	787 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	IVNS1ABP	Q9Y6Y0	642 aa		29.15	■■■□□ 2.26
RELA-223	ENST00000534283	EEF2	P13639	858 aa	Known RBP	29.14	■■■□□ 2.26
RELA-223	ENST00000534283	MB21D1	Q8N884	522 aa		29.14	■■■□□ 2.26
RELA-223	ENST00000534283	SH2D4A	Q9H788	454 aa		29.14	■■■□□ 2.26
RELA-223	ENST00000534283	KANSL2	Q9H9L4	492 aa		29.14	■■■□□ 2.26
RELA-223	ENST00000534283	STAP2	Q9UGK3	403 aa		29.14	■■■□□ 2.26
RELA-223	ENST00000534283	STRN	O43815	780 aa		29.13	■■■□□ 2.25
RELA-223	ENST00000534283	ERCC3	P19447	782 aa		29.13	■■■□□ 2.25
RELA-223	ENST00000534283	GIMAP6	Q6P9H5	292 aa		29.13	■■■□□ 2.25
RELA-223	ENST00000534283	C7orf61	Q8IZ16	206 aa		29.13	■■■□□ 2.25
RELA-223	ENST00000534283	ATG4C	Q96DT6	458 aa		29.13	■■■□□ 2.25
RELA-223	ENST00000534283	ARPP21	Q9UBL0	812 aa	Predicted RBP	29.13	■■■□□ 2.25
RELA-223	ENST00000534283	ADAMTS5	Q9UNA0	930 aa		29.13	■■■□□ 2.25
RELA-223	ENST00000534283	WDR46	O15213	610 aa	Known RBP	29.12	■■■□□ 2.25
RELA-223	ENST00000534283	RNF113A	O15541	343 aa	Known RBP	29.12	■■■□□ 2.25
RELA-223	ENST00000534283	FLOT1	O75955	427 aa		29.12	■■■□□ 2.25
RELA-223	ENST00000534283	ATP2B2	Q01814	1243 aa		29.12	■■■□□ 2.25
RELA-223	ENST00000534283	TRPV1	Q8NER1	839 aa		29.12	■■■□□ 2.25
RELA-223	ENST00000534283	APPBP2	Q92624	585 aa		29.12	■■■□□ 2.25
RELA-223	ENST00000534283		A0A1W2PPC1	479 aa		29.11	■■■□□ 2.25
RELA-223	ENST00000534283	ADORA2A	P29274	412 aa		29.11	■■■□□ 2.25
RELA-223	ENST00000534283	CYP2C19	P33261	490 aa		29.11	■■■□□ 2.25
RELA-223	ENST00000534283	GPATCH3	Q96I76	525 aa		29.11	■■■□□ 2.25
RELA-223	ENST00000534283	GDF15	Q99988	308 aa		29.11	■■■□□ 2.25
RELA-223	ENST00000534283	COBL	O75128	1261 aa		29.1	■■■□□ 2.25
RELA-223	ENST00000534283	TMEM132B	Q14DG7	1078 aa		29.09	■■■□□ 2.25
RELA-223	ENST00000534283	OLFML2B	Q68BL8	750 aa		29.09	■■■□□ 2.25
RELA-223	ENST00000534283	MROH8	Q9H579	483 aa		29.09	■■■□□ 2.25
RELA-223	ENST00000534283	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	29.09	■■■□□ 2.25
RELA-223	ENST00000534283	DDX20	Q9UHI6	824 aa	Known RBP	29.09	■■■□□ 2.25
RELA-223	ENST00000534283	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	29.09	■■■□□ 2.25
RELA-223	ENST00000534283	ZFY	P08048	801 aa	Predicted RBP	29.08	■■■□□ 2.25
RELA-223	ENST00000534283	RASA1	P20936	1047 aa		29.08	■■■□□ 2.25
RELA-223	ENST00000534283	BMP8B	P34820	402 aa		29.08	■■■□□ 2.25
RELA-223	ENST00000534283	DPP9	Q86TI2	863 aa		29.08	■■■□□ 2.25
RELA-223	ENST00000534283	ABRA	Q8N0Z2	381 aa		29.08	■■■□□ 2.25
RELA-223	ENST00000534283	FBXO28	Q9NVF7	368 aa		29.08	■■■□□ 2.25
RELA-223	ENST00000534283	SZT2	Q5T011	3432 aa		29.08	■■■□□ 2.25
RELA-223	ENST00000534283	CYBA	P13498	195 aa		29.07	■■■□□ 2.24
RELA-223	ENST00000534283	PI4K2B	Q8TCG2	481 aa		29.07	■■■□□ 2.24
RELA-223	ENST00000534283	OTUD7A	Q8TE49	926 aa	Predicted RBP	29.07	■■■□□ 2.24
RELA-223	ENST00000534283	ROBO3	Q96MS0	1386 aa		29.06	■■■□□ 2.24
RELA-223	ENST00000534283		M0R2C6	588 aa		29.06	■■■□□ 2.24
RELA-223	ENST00000534283	GPAA1	O43292	621 aa		29.06	■■■□□ 2.24
RELA-223	ENST00000534283	RLF	Q13129	1914 aa		29.06	■■■□□ 2.24
RELA-223	ENST00000534283	TTC41P	Q6P2S7	1318 aa		29.05	■■■□□ 2.24
RELA-223	ENST00000534283	PLS1	Q14651	629 aa		29.05	■■■□□ 2.24
RELA-223	ENST00000534283	LRRC26	Q2I0M4	334 aa		29.05	■■■□□ 2.24
RELA-223	ENST00000534283	NCAPG2	Q86XI2	1143 aa		29.05	■■■□□ 2.24
RELA-223	ENST00000534283	MINDY4B	A8MYZ0	360 aa		29.04	■■■□□ 2.24
RELA-223	ENST00000534283	MSC	O60682	206 aa		29.04	■■■□□ 2.24
RELA-223	ENST00000534283	SYN1	P17600	705 aa		29.04	■■■□□ 2.24
RELA-223	ENST00000534283	REPS2	Q8NFH8	660 aa		29.04	■■■□□ 2.24
RELA-223	ENST00000534283	GOPC	Q9HD26	462 aa		29.04	■■■□□ 2.24
RELA-223	ENST00000534283	NYAP2	Q9P242	653 aa		29.04	■■■□□ 2.24

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