RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	ISCA1	Q9BUE6	129 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	DNAJC25	Q9H1X3	360 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	LATS2	Q9NRM7	1088 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	C9orf78	Q9NZ63	289 aa	Predicted RBP	7	□□□□□ -1.29
CHKA-208	ENST00000533910	HCN2	Q9UL51	889 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	TRPC5	Q9UL62	973 aa	Predicted RBP	7	□□□□□ -1.29
CHKA-208	ENST00000533910	C4A	P0C0L4	1744 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	C4B	P0C0L5	1744 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	COL24A1	Q17RW2	1714 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	LRP5	O75197	1615 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	CASZ1	Q86V15	1759 aa		7	□□□□□ -1.29
CHKA-208	ENST00000533910	DDX60	Q8IY21	1712 aa	Known RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	LOC102724428	A0A0B4J2F2	783 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	DCDC2B	A2VCK2	349 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	SRGAP3	O43295	1099 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	RPLP1	P05386	114 aa	Known RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	TARS	P26639	723 aa	Known RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	IL6ST	P40189	918 aa	Predicted RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	SIK1	P57059	783 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	TRIM28	Q13263	835 aa	Known RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	RABL6	Q3YEC7	729 aa	Predicted RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	MEI1	Q5TIA1	1274 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	FOXR1	Q6PIV2	292 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	NXPE4	Q6UWF7	544 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	RIPOR1	Q6ZS17	1223 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	SNX29	Q8TEQ0	813 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	RNF34	Q969K3	372 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	ACSBG1	Q96GR2	724 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	GMCL1	Q96IK5	515 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	CRISPLD1	Q9H336	500 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	KANSL3	Q9P2N6	904 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	EXOC6B	Q9Y2D4	811 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	ZBTB1	Q9Y2K1	713 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	NOP58	Q9Y2X3	529 aa	Known RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	DYRK1B	Q9Y463	629 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	GPC6	Q9Y625	555 aa	Predicted RBP	6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	MAP3K15	Q6ZN16	1313 aa		6.99	□□□□□ -1.29
CHKA-208	ENST00000533910	RGPD3	A6NKT7	1758 aa	Predicted RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	RGPD4	Q7Z3J3	1758 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910		H7C1W4	665 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	KCNQ2	O43526	872 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	RAB11FIP3	O75154	756 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	GDF11	O95390	407 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	EIF4B	P23588	611 aa	Known RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	ZNF76	P36508	570 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	TNNI2	P48788	182 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	EIF5	P55010	431 aa	Known RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	RASSF7	Q02833	373 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	ITPK1	Q13572	414 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	ZNF394	Q53GI3	561 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	HSP90AB4P	Q58FF6	505 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	TTC22	Q5TAA0	569 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	PDE12	Q6L8Q7	609 aa	Known RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	KIF6	Q6ZMV9	814 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	PGBD3	Q8N328	593 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	CCDC191	Q8NCU4	936 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	FBF1	Q8TES7	1133 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	LRRCC1	Q9C099	1032 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	ACBD3	Q9H3P7	528 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	BICC1	Q9H694	974 aa	Known RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	CWC25	Q9NXE8	425 aa	Predicted RBP	6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	PCDHGB7	Q9Y5F8	929 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	AOX1	Q06278	1338 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	CNTNAP4	Q9C0A0	1308 aa		6.98	□□□□□ -1.29
CHKA-208	ENST00000533910	ERVV-1	B6SEH8	477 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	KHNYN	O15037	678 aa	Known RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	SMARCA5	O60264	1052 aa	Predicted RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	GADD45B	O75293	160 aa	Predicted RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	CLSTN1	O94985	981 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	GSPT1	P15170	499 aa	Known RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	CRKL	P46109	303 aa	Known RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	SRSF11	Q05519	484 aa	Known RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	TCIRG1	Q13488	830 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	HSP90AB3P	Q58FF7	597 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	EPHA10	Q5JZY3	1008 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	INTS5	Q6P9B9	1019 aa	Known RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	UBR3	Q6ZT12	1888 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	UBE3B	Q7Z3V4	1068 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	OTUD7A	Q8TE49	926 aa	Predicted RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	CDHR2	Q9BYE9	1310 aa		6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	USP42	Q9H9J4	1324 aa	Known RBP	6.97	□□□□□ -1.29
CHKA-208	ENST00000533910	TNS1	Q9HBL0	1735 aa	Known RBP	6.96	□□□□□ -1.29
CHKA-208	ENST00000533910		A0A087WZG4	1122 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	SURF6	O75683	361 aa	Known RBP	6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	ACPP	P15309	386 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	RFX5	P48382	616 aa	Predicted RBP	6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	PDE1A	P54750	535 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	MAP3K10	Q02779	954 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	ERC1	Q8IUD2	1116 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	KIF1BP	Q96EK5	621 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	PLA2G12B	Q9BX93	195 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	BCO2	Q9BYV7	579 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	C12orf49	Q9H741	205 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	COPRS	Q9NQ92	184 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	ENAM	Q9NRM1	1142 aa		6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	ABI2	Q9NYB9	513 aa	Predicted RBP	6.96	□□□□□ -1.3
CHKA-208	ENST00000533910	ZFAT	Q9P243	1243 aa		6.96	□□□□□ -1.3

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