RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
CLP1-206ENST00000533905 FBXO28Q9NVF7 368 aa12.45□□□□□ -0.42
CLP1-206ENST00000533905 MCM9Q9NXL9 1143 aa12.45□□□□□ -0.42
CLP1-206ENST00000533905 BAZ2AQ9UIF9 1905 aaKnown RBP12.45□□□□□ -0.42
CLP1-206ENST00000533905 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 RBAK-RBAKDNI3L0D1 243 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
CLP1-206ENST00000533905 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
CLP1-206ENST00000533905 PTPREP23469 700 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 PRAMEF19Q5SWL8 479 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 LBX2Q6XYB7 198 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 LENG1Q96BZ8 264 aaPredicted RBP12.44□□□□□ -0.42
CLP1-206ENST00000533905 PUS7LQ9H0K6 701 aaKnown RBP12.44□□□□□ -0.42
CLP1-206ENST00000533905 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 NR2E3Q9Y5X4 410 aa12.44□□□□□ -0.42
CLP1-206ENST00000533905 RGS2P41220 211 aa12.43□□□□□ -0.42
CLP1-206ENST00000533905 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
CLP1-206ENST00000533905 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
CLP1-206ENST00000533905 STK11IPQ8N1F8 1099 aa12.43□□□□□ -0.42
CLP1-206ENST00000533905 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
CLP1-206ENST00000533905 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
CLP1-206ENST00000533905 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 CYBAP13498 195 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 ERCC3P19447 782 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 ADORA2AP29274 412 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
CLP1-206ENST00000533905 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
CLP1-206ENST00000533905 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 ERC1Q8IUD2 1116 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 NUP88Q99567 741 aaPredicted RBP12.42□□□□□ -0.42
CLP1-206ENST00000533905 CRNKL1Q9BZJ0 848 aaKnown RBP12.42□□□□□ -0.42
CLP1-206ENST00000533905 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
CLP1-206ENST00000533905 GINM1Q9NU53 330 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 PAG1Q9NWQ8 432 aa12.42□□□□□ -0.42
CLP1-206ENST00000533905 LTBP2Q14767 1821 aa12.41□□□□□ -0.42
CLP1-206ENST00000533905 GREB1LQ9C091 1923 aaPredicted RBP12.41□□□□□ -0.42
CLP1-206ENST00000533905 HOXC6P09630 235 aa12.41□□□□□ -0.42
CLP1-206ENST00000533905 TAL1P17542 331 aaPredicted RBP12.41□□□□□ -0.42
CLP1-206ENST00000533905 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
CLP1-206ENST00000533905 GJC2Q5T442 439 aaPredicted RBP12.41□□□□□ -0.42
CLP1-206ENST00000533905 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
CLP1-206ENST00000533905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLP1-206ENST00000533905 HAUS7Q99871 368 aa12.41□□□□□ -0.42
CLP1-206ENST00000533905 TANGO6Q9C0B7 1094 aa12.41□□□□□ -0.42
CLP1-206ENST00000533905 SPATC1LQ9H0A9 340 aa12.41□□□□□ -0.42
CLP1-206ENST00000533905 COL11A1P12107 1806 aaPredicted RBP12.4□□□□□ -0.42
CLP1-206ENST00000533905 SLC15A5A6NIM6 579 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 USP17L21D6R901 530 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
CLP1-206ENST00000533905 ATP5JP18859 108 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 DSG3P32926 999 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 BMP8BP34820 402 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 CDK8P49336 464 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
CLP1-206ENST00000533905 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
CLP1-206ENST00000533905 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
CLP1-206ENST00000533905 DDX20Q9UHI6 824 aaKnown RBP12.4□□□□□ -0.42
CLP1-206ENST00000533905 PGK2P07205 417 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 EEF2P13639 858 aaKnown RBP12.39□□□□□ -0.43
CLP1-206ENST00000533905 PTGS1P23219 599 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 ITGB8P26012 769 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 CNGA1P29973 690 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 USP14P54578 494 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 ICA1Q05084 483 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 FAM47AQ5JRC9 791 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 C16orf86Q6ZW13 317 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 OSBP2Q969R2 916 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 TACC3Q9Y6A5 838 aa12.39□□□□□ -0.43
CLP1-206ENST00000533905 DDX49Q9Y6V7 483 aaKnown RBP12.39□□□□□ -0.43
CLP1-206ENST00000533905 M0R2C6 588 aa12.38□□□□□ -0.43
CLP1-206ENST00000533905 C9orf50Q5SZB4 431 aa12.38□□□□□ -0.43
CLP1-206ENST00000533905 TMEM179Q6ZVK1 233 aa12.38□□□□□ -0.43
CLP1-206ENST00000533905 RPAP2Q8IXW5 612 aaPredicted RBP12.38□□□□□ -0.43
CLP1-206ENST00000533905 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
CLP1-206ENST00000533905 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
CLP1-206ENST00000533905 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
CLP1-206ENST00000533905 A0A1W2PPC1 479 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 FOXP2O15409 715 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 ADCY6O43306 1168 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 IGSF3O75054 1194 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 FLOT1O75955 427 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 NEFLP07196 543 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 RASA1P20936 1047 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 RTP1P59025 263 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 PLS1Q14651 629 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 COG2Q14746 738 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 TTF1Q15361 905 aaPredicted RBP12.37□□□□□ -0.43
CLP1-206ENST00000533905 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 CCAR1Q8IX12 1150 aaKnown RBP12.37□□□□□ -0.43
CLP1-206ENST00000533905 DEFB123Q8N688 67 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms