RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TNPO2O14787 897 aaKnown RBP18.29■□□□□ 0.52
CPSF1-210ENST00000532935 HSPD1P10809 573 aaKnown RBP18.29■□□□□ 0.52
CPSF1-210ENST00000532935 KIAA1755Q5JYT7 1200 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 GPRC5AQ8NFJ5 357 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 RAET1EQ8TD07 263 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 LPAR1Q92633 364 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 VCPKMTQ9H867 229 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 DIAPH3Q9NSV4 1193 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 RBPJLQ9UBG7 517 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 GABRQQ9UN88 632 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 A0A0G2JMZ2 1700 aa18.29■□□□□ 0.52
CPSF1-210ENST00000532935 KIAA0100Q14667 2235 aaKnown RBP18.29■□□□□ 0.52
CPSF1-210ENST00000532935 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
CPSF1-210ENST00000532935 PEX10O60683 326 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 GSPT1P15170 499 aaKnown RBP18.28■□□□□ 0.52
CPSF1-210ENST00000532935 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
CPSF1-210ENST00000532935 CTDSPL2Q05D32 466 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 POTEEQ6S8J3 1075 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
CPSF1-210ENST00000532935 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 COA7Q96BR5 231 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 PAGR1Q9BTK6 254 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
CPSF1-210ENST00000532935 ZMYM6O95789 1325 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 IGKV6D-41A0A0C4DH26 115 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 FGAP02671 866 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 RGS19P49795 217 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 ERVK-9P63128 1117 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 ERVK-24P63145 666 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 ZNF333Q96JL9 665 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 NYAP2Q9P242 653 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 ANAPC4Q9UJX5 808 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 RABGAP1Q9Y3P9 1069 aa18.27■□□□□ 0.52
CPSF1-210ENST00000532935 PLIN4Q96Q06 1357 aa18.27■□□□□ 0.51
CPSF1-210ENST00000532935 TNRC18O15417 2968 aaPredicted RBP18.27■□□□□ 0.51
CPSF1-210ENST00000532935 SPDYE16A6NNV3 312 aaPredicted RBP18.26■□□□□ 0.51
CPSF1-210ENST00000532935 WDR46O15213 610 aaKnown RBP18.26■□□□□ 0.51
CPSF1-210ENST00000532935 TSPY3P0CV98 308 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 TSPY8P0CW00 308 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 FLT3LGP49771 235 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 COG2Q14746 738 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 Q3C1V9 767 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
CPSF1-210ENST00000532935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF1-210ENST00000532935 CNMDO75829 334 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 GRK4P32298 578 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 TFAP4Q01664 338 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 NEDD1Q8NHV4 660 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 HOXC10Q9NYD6 342 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 TACC3Q9Y6A5 838 aa18.25■□□□□ 0.51
CPSF1-210ENST00000532935 RAD21O60216 631 aa18.24■□□□□ 0.51
CPSF1-210ENST00000532935 IRF5Q13568 498 aa18.24■□□□□ 0.51
CPSF1-210ENST00000532935 BTBD7Q9P203 1132 aa18.24■□□□□ 0.51
CPSF1-210ENST00000532935 CLIP2Q9UDT6 1046 aa18.24■□□□□ 0.51
CPSF1-210ENST00000532935 ADCY3O60266 1144 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 FLOT1O75955 427 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 TTLL1O95922 423 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 FGRP09769 529 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 MAPK4P31152 587 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
CPSF1-210ENST00000532935 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
CPSF1-210ENST00000532935 SLAIN1Q8ND83 568 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 MKL1Q969V6 931 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 PORCNQ9H237 461 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 GJD2Q9UKL4 321 aa18.23■□□□□ 0.51
CPSF1-210ENST00000532935 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 F5H6K3 240 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 ORC4O43929 436 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 DSG3P32926 999 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 HAND2P61296 217 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 CCNA1P78396 465 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 KLRC3Q07444 240 aa18.22■□□□□ 0.51
CPSF1-210ENST00000532935 ZNFX1Q9P2E3 1918 aaKnown RBP18.21■□□□□ 0.51
CPSF1-210ENST00000532935 POTEFA5A3E0 1075 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 RANBP6O60518 1105 aaKnown RBP18.21■□□□□ 0.51
CPSF1-210ENST00000532935 NDUFB10O96000 172 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 MYCP01106 439 aaPredicted RBP18.21■□□□□ 0.51
CPSF1-210ENST00000532935 ELNP15502 786 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 GPR142Q7Z601 462 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
CPSF1-210ENST00000532935 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 TMEM106CQ9BVX2 250 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 NBPF3Q9H094 633 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 BIN2Q9UBW5 565 aaPredicted RBP18.21■□□□□ 0.51
CPSF1-210ENST00000532935 SYNPO2Q9UMS6 1093 aa18.21■□□□□ 0.51
CPSF1-210ENST00000532935 MKI67P46013 3256 aaKnown RBP18.21■□□□□ 0.51
CPSF1-210ENST00000532935 MLLT1Q03111 559 aaPredicted RBP18.2■□□□□ 0.5
CPSF1-210ENST00000532935 PPP4R3BQ5MIZ7 849 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
CPSF1-210ENST00000532935 PLEKHH3Q7Z736 793 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 MB21D1Q8N884 522 aa18.2■□□□□ 0.5
CPSF1-210ENST00000532935 SOCS4Q8WXH5 440 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms