RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 RPS6KA4O75676 772 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 STRN3Q13033 797 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 CCDC93Q567U6 631 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 CDC37L1Q7L3B6 337 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 TRMT2AQ8IZ69 625 aaKnown RBP9.72□□□□□ -0.85
CTNND1-232ENST00000532649 EPSTI1Q96J88 318 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 GOLGA8HP0CJ92 632 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 RAPGEF1Q13905 1077 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 ERCC6LQ2NKX8 1250 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 STK24Q9Y6E0 443 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 ABCB5Q2M3G0 1257 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 AFAP1L2Q8N4X5 818 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 ZSWIM4Q9H7M6 989 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 IFNKQ9P0W0 207 aa9.72□□□□□ -0.85
CTNND1-232ENST00000532649 RAD17O75943 681 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 ME3Q16798 604 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 ANKS4BQ8N8V4 417 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 DNM3Q9UQ16 869 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 MAPK8IP1Q9UQF2 711 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 QRICH2Q9H0J4 1663 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 NPR1P16066 1061 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 PPP1R2P41236 205 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 MAP7Q14244 749 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 DALRD3Q5D0E6 543 aaKnown RBP9.71□□□□□ -0.85
CTNND1-232ENST00000532649 VPS52Q8N1B4 723 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 GTF3C6Q969F1 213 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 CCDC42Q96M95 316 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 CSRNP1Q96S65 589 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 TACC3Q9Y6A5 838 aa9.71□□□□□ -0.85
CTNND1-232ENST00000532649 SSH2Q76I76 1423 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 MED23Q9ULK4 1368 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 GRAPQ13588 217 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 HLFQ16534 295 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 GRAPLQ8TC17 118 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-232ENST00000532649 CCDC114Q96M63 670 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 RAB3IPQ96QF0 476 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-232ENST00000532649 SELENOSQ9BQE4 189 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 ATP8A2Q9NTI2 1148 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 E7EVH7 732 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 XRCC6P12956 609 aaKnown RBP eCLIP9.71□□□□□ -0.862e-8■□□□□ 8.5
CTNND1-232ENST00000532649 MYL5Q02045 173 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 NSMCE1Q8WV22 266 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 FAM184BQ9ULE4 1060 aa9.71□□□□□ -0.86
CTNND1-232ENST00000532649 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 KLRF2D3W0D1 207 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 ARHGEF16Q5VV41 709 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 TBC1D31Q96DN5 1066 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 ZNF274Q96GC6 653 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 GIPC1O14908 333 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 DAPK3O43293 454 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 SARNPP82979 210 aaKnown RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 RAD51AP2Q09MP3 1159 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 DYMQ7RTS9 669 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 NLRX1Q86UT6 975 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 FANCBQ8NB91 859 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 JAKMIP2Q96AA8 810 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 E9PCH4 1651 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 CIB2O75838 187 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 FLOT1O75955 427 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 WDR44Q5JSH3 913 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 CLEC4GQ6UXB4 293 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 CABP7Q86V35 215 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 NOC4LQ9BVI4 516 aaKnown RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 TRIM6Q9C030 488 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 PSTPIP2Q9H939 334 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 RBM6P78332 1123 aaKnown RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 SLFN13Q68D06 897 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 ZMYM6O95789 1325 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 CALUO43852 315 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 TACC1O75410 805 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 KRT5P13647 590 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 KRT83P78385 493 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 LEO1Q8WVC0 666 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 GJD4Q96KN9 370 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 ANTXR1Q9H6X2 564 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 FAM204AQ9H8W3 233 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 SLC5A4Q9NY91 659 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 OVOS2A0A0G2JMS6 1433 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 OVOS2A0A0J9YW53 1432 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 CPSF1Q10570 1443 aaKnown RBP9.7□□□□□ -0.86
CTNND1-232ENST00000532649 OVOS2Q6IE36 1432 aa9.7□□□□□ -0.86
CTNND1-232ENST00000532649 TMEM232C9JQI7 657 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 GAS7O60861 476 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 HERC4Q5GLZ8 1057 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-232ENST00000532649 ZMYM1Q5SVZ6 1142 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 PI16Q6UXB8 463 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 FBXO11Q86XK2 927 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 TBC1D7Q9P0N9 293 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 FEZ2Q9UHY8 353 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-232ENST00000532649 AGTPBP1Q9UPW5 1226 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 MRPL11Q9Y3B7 192 aaKnown RBP9.69□□□□□ -0.86
CTNND1-232ENST00000532649 ADCY9O60503 1353 aa9.69□□□□□ -0.86
CTNND1-232ENST00000532649 M0QZ92 97 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms