RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CYP7A1P22680 504 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 IREB2P48200 963 aaKnown RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 RGS3P49796 1198 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 ATP1A2P50993 1020 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 IRX6P78412 446 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 MAP2K1Q02750 393 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 TCP10Q12799 353 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 MAP3K12Q12852 859 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 PICALMQ13492 652 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 SLFNL1Q499Z3 407 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 LDLRAD1Q5T700 205 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 TMED8Q6PL24 325 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 TAS1R3Q7RTX0 852 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 CDAN1Q8IWY9 1227 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 DEPDC4Q8N2C3 294 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 GCC1Q96CN9 775 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 IDI2Q9BXS1 227 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 BOLA2Q9H3K6 86 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 ANTXR1Q9H6X2 564 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 METTL5Q9NRN9 209 aaKnown RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 SEPT9Q9UHD8 586 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 RABGEF1Q9UJ41 708 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 FZD1Q9UP38 647 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 RBM19Q9Y4C8 960 aaKnown RBP6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 SSC5DA1L4H1 1573 aa6.98□□□□□ -1.29
HMGB1P42-201ENST00000532126 PAPPA2Q9BXP8 1791 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 FAM155AB1AL88 458 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 ENTPD3O75355 529 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 USP2O75604 605 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 WDHD1O75717 1129 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 HSPA1AP0DMV8 641 aaKnown RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 HSPA1BP0DMV9 641 aaKnown RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 HOXB1P14653 301 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 GTF2F1P35269 517 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 RHBDL3P58872 404 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 MCCD1P59942 119 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 DPYDQ12882 1025 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 NCOA4Q13772 614 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 MAP3K11Q16584 847 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 CCDC144BQ3MJ40 725 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 SLC9C2Q5TAH2 1124 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 ANKRD45Q5TZF3 282 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 DCAF15Q66K64 600 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 ADGRA1Q86SQ6 560 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 RETREG3Q86VR2 466 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 NT5DC4Q86YG4 428 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 RASAL3Q86YV0 1011 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 ZFPM1Q8IX07 1006 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 TEX11Q8IYF3 940 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 MAGEB6Q8N7X4 407 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 SH3RF3Q8TEJ3 882 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 AIDAQ96BJ3 306 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 SLC10A4Q96EP9 437 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 HAUS7Q99871 368 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 TINF2Q9BSI4 451 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 SCUBE2Q9NQ36 999 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 PAG1Q9NWQ8 432 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 AATFQ9NY61 560 aaKnown RBP eCLIP6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 PPME1Q9Y570 386 aa6.97□□□□□ -1.29
HMGB1P42-201ENST00000532126 RPAP1Q9BWH6 1393 aaPredicted RBP6.96□□□□□ -1.29
HMGB1P42-201ENST00000532126 TRPM7Q96QT4 1865 aa6.96□□□□□ -1.29
HMGB1P42-201ENST00000532126 SNPHO15079 494 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 PPP4CP60510 307 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 KIF23Q02241 960 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZNF211Q13398 564 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 EML3Q32P44 896 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 EGFLAMQ63HQ2 1017 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 MIGA1Q8NAN2 632 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 TMEM87AQ8NBN3 555 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 RNF34Q969K3 372 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 EDC3Q96F86 508 aaKnown RBP6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 CLMNQ96JQ2 1002 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 WRNIP1Q96S55 665 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 CSRNP1Q96S65 589 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 DDX4Q9NQI0 724 aaKnown RBP6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 WBP1LQ9NX94 342 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 CXXC1Q9P0U4 656 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 CSADQ9Y600 493 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 TTC41PQ6P2S7 1318 aa6.96□□□□□ -1.3
HMGB1P42-201ENST00000532126 RFX7Q2KHR2 1363 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 MYH13Q9UKX3 1938 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 DDTLA6NHG4 134 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ERC2O15083 957 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 CA12O43570 354 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 IGHDP01880 384 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 PDE6AP16499 860 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 MX1P20591 662 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ANAPC15P60006 121 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 VGLL4Q14135 290 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 PTPROQ16827 1216 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAP7D1Q3KQU3 841 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms