RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CLIP2Q9UDT6 1046 aa24.57■■□□□ 1.52
CCS-207ENST00000531990 NEDD4P46934 1319 aa24.57■■□□□ 1.52
CCS-207ENST00000531990 USP17L15C9J2P7 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L13C9JLJ4 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L11C9JVI0 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L18D6R9N7 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L22D6RA61 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L17D6RBQ6 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L19D6RCP7 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L20D6RJB6 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 RAD21O60216 631 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 USP17L24Q0WX57 530 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 TRDNQ13061 729 aa24.56■■□□□ 1.52
CCS-207ENST00000531990 CYP21A2P08686 494 aa24.55■■□□□ 1.52
CCS-207ENST00000531990 SP3Q02447 781 aa24.55■■□□□ 1.52
CCS-207ENST00000531990 RPAP3Q9H6T3 665 aaPredicted RBP24.55■■□□□ 1.52
CCS-207ENST00000531990 CPA4Q9UI42 421 aa24.55■■□□□ 1.52
CCS-207ENST00000531990 SYNPO2Q9UMS6 1093 aa24.55■■□□□ 1.52
CCS-207ENST00000531990 STX8Q9UNK0 236 aa24.55■■□□□ 1.52
CCS-207ENST00000531990 GCLCP48506 637 aaPredicted RBP24.54■■□□□ 1.52
CCS-207ENST00000531990 C17orf99Q6UX52 265 aa24.54■■□□□ 1.52
CCS-207ENST00000531990 MKL1Q969V6 931 aa24.54■■□□□ 1.52
CCS-207ENST00000531990 IL17RBQ9NRM6 502 aa24.54■■□□□ 1.52
CCS-207ENST00000531990 TCP11L1Q9NUJ3 509 aa24.54■■□□□ 1.52
CCS-207ENST00000531990 ADGRA2Q96PE1 1338 aa24.54■■□□□ 1.52
CCS-207ENST00000531990 B4E1Z4 1266 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 WDR46O15213 610 aaKnown RBP24.53■■□□□ 1.52
CCS-207ENST00000531990 KDM4AO75164 1064 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 CATSPERGQ6ZRH7 1159 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 IQCA1Q86XH1 822 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 SPICE1Q8N0Z3 855 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 ERO1AQ96HE7 468 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 TANGO6Q9C0B7 1094 aa24.53■■□□□ 1.52
CCS-207ENST00000531990 NMT2O60551 498 aa24.52■■□□□ 1.52
CCS-207ENST00000531990 KIF22Q14807 665 aa24.52■■□□□ 1.52
CCS-207ENST00000531990 CCDC178Q5BJE1 867 aa24.52■■□□□ 1.52
CCS-207ENST00000531990 RNF20Q5VTR2 975 aa24.52■■□□□ 1.52
CCS-207ENST00000531990 RALYLQ86SE5 291 aaKnown RBP24.52■■□□□ 1.52
CCS-207ENST00000531990 LRRC47Q8N1G4 583 aaKnown RBP24.52■■□□□ 1.52
CCS-207ENST00000531990 GTF3C2Q8WUA4 911 aaPredicted RBP24.52■■□□□ 1.52
CCS-207ENST00000531990 P2RX7Q99572 595 aaKnown RBP24.52■■□□□ 1.52
CCS-207ENST00000531990 F5H6K3 240 aa24.51■■□□□ 1.51
CCS-207ENST00000531990 REC8O95072 547 aa24.51■■□□□ 1.51
CCS-207ENST00000531990 KLRC3Q07444 240 aa24.51■■□□□ 1.51
CCS-207ENST00000531990 ARHGEF6Q15052 776 aa24.51■■□□□ 1.51
CCS-207ENST00000531990 KIAA1755Q5JYT7 1200 aa24.51■■□□□ 1.51
CCS-207ENST00000531990 HERVK_113P62684 666 aa24.5■■□□□ 1.51
CCS-207ENST00000531990 GMCL1P1Q8NEA9 526 aa24.5■■□□□ 1.51
CCS-207ENST00000531990 TTC14Q96N46 770 aa24.5■■□□□ 1.51
CCS-207ENST00000531990 E7EWF7 191 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 SLC27A2O14975 620 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 NDUFB10O96000 172 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 BCRP11274 1271 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 TOP1P11387 765 aaKnown RBP24.49■■□□□ 1.51
CCS-207ENST00000531990 NECTIN1Q15223 517 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 CREB3L3Q68CJ9 461 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 NCOA7Q8NI08 942 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 UBAC1Q9BSL1 405 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 HOXC10Q9NYD6 342 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 ZSWIM5Q9P217 1185 aa24.49■■□□□ 1.51
CCS-207ENST00000531990 FLOT1O75955 427 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 COG2Q14746 738 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 FAM110CQ1W6H9 321 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 SLFN13Q68D06 897 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 ANKRD13CQ8N6S4 541 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 CD99L2Q8TCZ2 262 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 ZSCAN10Q96SZ4 725 aaPredicted RBP24.48■■□□□ 1.51
CCS-207ENST00000531990 ZKSCAN3Q9BRR0 538 aa24.48■■□□□ 1.51
CCS-207ENST00000531990 NOVP48745 357 aa24.47■■□□□ 1.51
CCS-207ENST00000531990 LACTBP83111 547 aaPredicted RBP24.47■■□□□ 1.51
CCS-207ENST00000531990 FAM83BQ5T0W9 1011 aa24.47■■□□□ 1.51
CCS-207ENST00000531990 MYPNQ86TC9 1320 aa24.46■■□□□ 1.51
CCS-207ENST00000531990 COL13A1Q5TAT6 717 aaPredicted RBP24.46■■□□□ 1.51
CCS-207ENST00000531990 CTU1Q7Z7A3 348 aaKnown RBP24.46■■□□□ 1.51
CCS-207ENST00000531990 DGKHQ86XP1 1220 aa24.46■■□□□ 1.51
CCS-207ENST00000531990 NKX2-3Q8TAU0 364 aa24.46■■□□□ 1.51
CCS-207ENST00000531990 ISY1Q9ULR0 285 aaKnown RBP24.46■■□□□ 1.51
CCS-207ENST00000531990 ZKSCAN1P17029 563 aaPredicted RBP24.45■■□□□ 1.5
CCS-207ENST00000531990 STOX1Q6ZVD7 989 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 NUP88Q99567 741 aaPredicted RBP24.45■■□□□ 1.5
CCS-207ENST00000531990 TMEM47Q9BQJ4 181 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 PAGR1Q9BTK6 254 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 MORF4L1Q9UBU8 362 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 RABGAP1Q9Y3P9 1069 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 TAF6LQ9Y6J9 622 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 PARP14Q460N5 1801 aa24.45■■□□□ 1.5
CCS-207ENST00000531990 TNKSO95271 1327 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 SPDYE16A6NNV3 312 aaPredicted RBP24.44■■□□□ 1.5
CCS-207ENST00000531990 BMP3P12645 472 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 SLC1A4P43007 532 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 RCSD1Q6JBY9 416 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 SAMD1Q6SPF0 538 aaPredicted RBP24.44■■□□□ 1.5
CCS-207ENST00000531990 LBX2Q6XYB7 198 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 GPRC5AQ8NFJ5 357 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 GMCL1Q96IK5 515 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 EFCC1Q9HA90 598 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 MTMR7Q9Y216 660 aa24.44■■□□□ 1.5
CCS-207ENST00000531990 MGAMO43451 1857 aa24.43■■□□□ 1.5
CCS-207ENST00000531990 ERICH2A1L162 156 aa24.43■■□□□ 1.5
CCS-207ENST00000531990 EPB41L2O43491 1005 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms