RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 PRAMEF19Q5SWL8 479 aa25.61■■□□□ 1.69
CHKA-206ENST00000531341 SLC39A5Q6ZMH5 540 aa25.61■■□□□ 1.69
CHKA-206ENST00000531341 DPP9Q86TI2 863 aa25.61■■□□□ 1.69
CHKA-206ENST00000531341 CERS3Q8IU89 383 aa25.61■■□□□ 1.69
CHKA-206ENST00000531341 COG2Q14746 738 aa25.6■■□□□ 1.69
CHKA-206ENST00000531341 C9orf50Q5SZB4 431 aa25.6■■□□□ 1.69
CHKA-206ENST00000531341 MPHOSPH10O00566 681 aaKnown RBP25.59■■□□□ 1.69
CHKA-206ENST00000531341 ERCC3P19447 782 aa25.59■■□□□ 1.69
CHKA-206ENST00000531341 SPATC1LQ9H0A9 340 aa25.59■■□□□ 1.69
CHKA-206ENST00000531341 EXOC6BQ9Y2D4 811 aa25.59■■□□□ 1.69
CHKA-206ENST00000531341 MAGEB6P1A0A0J9YX57 407 aa25.58■■□□□ 1.69
CHKA-206ENST00000531341 CYP2D6P10635 497 aa25.58■■□□□ 1.69
CHKA-206ENST00000531341 OLFML2BQ68BL8 750 aa25.58■■□□□ 1.69
CHKA-206ENST00000531341 HOXC10Q9NYD6 342 aa25.58■■□□□ 1.69
CHKA-206ENST00000531341 PRKAG2Q9UGJ0 569 aa25.58■■□□□ 1.69
CHKA-206ENST00000531341 LTBP2Q14767 1821 aa25.58■■□□□ 1.68
CHKA-206ENST00000531341 TRIM60Q495X7 471 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 CEP85Q6P2H3 762 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 SH3RF1Q7Z6J0 888 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 AACSQ86V21 672 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 SIAH1Q8IUQ4 282 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 ITPRIPQ8IWB1 547 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 SLC44A5Q8NCS7 719 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 ARRDC4Q8NCT1 418 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 BADQ92934 168 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 TANGO6Q9C0B7 1094 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 MCM9Q9NXL9 1143 aa25.57■■□□□ 1.68
CHKA-206ENST00000531341 CCER2I3L3R5 266 aa25.56■■□□□ 1.68
CHKA-206ENST00000531341 STRNO43815 780 aa25.56■■□□□ 1.68
CHKA-206ENST00000531341 MYCNP04198 464 aaPredicted RBP25.56■■□□□ 1.68
CHKA-206ENST00000531341 CLEC10AQ8IUN9 316 aa25.56■■□□□ 1.68
CHKA-206ENST00000531341 SDR42E1Q8WUS8 393 aa25.56■■□□□ 1.68
CHKA-206ENST00000531341 IL1RAPL2Q9NP60 686 aa25.56■■□□□ 1.68
CHKA-206ENST00000531341 PRDM5Q9NQX1 630 aaPredicted RBP25.56■■□□□ 1.68
CHKA-206ENST00000531341 RLFQ13129 1914 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 TRIM43BA6NCK2 446 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 SEPT4O43236 478 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 ADCYAP1R1P41586 468 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 SLC9C2Q5TAH2 1124 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 ZNF697Q5TEC3 545 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 FERMT2Q96AC1 680 aa25.55■■□□□ 1.68
CHKA-206ENST00000531341 TRIM43Q96BQ3 446 aaPredicted RBP25.55■■□□□ 1.68
CHKA-206ENST00000531341 CDX2Q99626 313 aaPredicted RBP25.55■■□□□ 1.68
CHKA-206ENST00000531341 KBTBD13C9JR72 458 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 SMIM22K7EJ46 135 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 PDE6AP16499 860 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 DSG3P32926 999 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 SNX17Q15036 470 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 FTSJ3Q8IY81 847 aaKnown RBP25.54■■□□□ 1.68
CHKA-206ENST00000531341 SHCBP1Q8NEM2 672 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 ATG4CQ96DT6 458 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 DYNLL2Q96FJ2 89 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 SEMA6BQ9H3T3 888 aa25.54■■□□□ 1.68
CHKA-206ENST00000531341 ZNF236Q9UL36 1845 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 TCRBV5S4A2TA0A5A2 114 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 PLS1Q14651 629 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 LRRC41Q15345 812 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 SLFNL1Q499Z3 407 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 NCAPG2Q86XI2 1143 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 SPICE1Q8N0Z3 855 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 LCORLQ8N3X6 602 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 MAML3Q96JK9 1138 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 CRNKL1Q9BZJ0 848 aaKnown RBP25.53■■□□□ 1.68
CHKA-206ENST00000531341 DCP1AQ9NPI6 582 aaPredicted RBP25.53■■□□□ 1.68
CHKA-206ENST00000531341 PDLIM7Q9NR12 457 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 ZNF532Q9HCE3 1301 aa25.53■■□□□ 1.68
CHKA-206ENST00000531341 A0A0G2JMZ2 1700 aa25.52■■□□□ 1.68
CHKA-206ENST00000531341 FAM47AQ5JRC9 791 aa25.52■■□□□ 1.68
CHKA-206ENST00000531341 TMED8Q6PL24 325 aaPredicted RBP25.52■■□□□ 1.68
CHKA-206ENST00000531341 NAV1Q8NEY1 1877 aa25.51■■□□□ 1.67
CHKA-206ENST00000531341 AKR1B1P15121 316 aa25.51■■□□□ 1.67
CHKA-206ENST00000531341 ITGB8P26012 769 aa25.51■■□□□ 1.67
CHKA-206ENST00000531341 TTYH1Q9H313 450 aaPredicted RBP25.51■■□□□ 1.67
CHKA-206ENST00000531341 PRKAB2O43741 272 aa25.5■■□□□ 1.67
CHKA-206ENST00000531341 TMEM132BQ14DG7 1078 aa25.5■■□□□ 1.67
CHKA-206ENST00000531341 SAMD1Q6SPF0 538 aaPredicted RBP25.5■■□□□ 1.67
CHKA-206ENST00000531341 TMEM179Q6ZVK1 233 aa25.5■■□□□ 1.67
CHKA-206ENST00000531341 MROH8Q9H579 483 aa25.5■■□□□ 1.67
CHKA-206ENST00000531341 ARMT1Q9H993 441 aa25.5■■□□□ 1.67
CHKA-206ENST00000531341 GOLIM4O00461 696 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 FLOT1O75955 427 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 TLE2Q04725 743 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 TTF1Q15361 905 aaPredicted RBP25.49■■□□□ 1.67
CHKA-206ENST00000531341 ABRAQ8N0Z2 381 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 RHPN1Q8TCX5 695 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 MYLIPQ8WY64 445 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 TMX2Q9Y320 296 aa25.49■■□□□ 1.67
CHKA-206ENST00000531341 EPHB4P54760 987 aa25.48■■□□□ 1.67
CHKA-206ENST00000531341 ERC1Q8IUD2 1116 aa25.48■■□□□ 1.67
CHKA-206ENST00000531341 MB21D1Q8N884 522 aa25.48■■□□□ 1.67
CHKA-206ENST00000531341 DNAJC2Q99543 621 aaKnown RBP25.48■■□□□ 1.67
CHKA-206ENST00000531341 VCPKMTQ9H867 229 aa25.48■■□□□ 1.67
CHKA-206ENST00000531341 MUC3AQ02505 3323 aa25.47■■□□□ 1.67
CHKA-206ENST00000531341 CYP2D7A0A087X1C5 515 aa25.47■■□□□ 1.67
CHKA-206ENST00000531341 CHGBP05060 677 aa25.47■■□□□ 1.67
CHKA-206ENST00000531341 PGK2P07205 417 aa25.47■■□□□ 1.67
CHKA-206ENST00000531341 TAL1P17542 331 aaPredicted RBP25.47■■□□□ 1.67
CHKA-206ENST00000531341 C1orf53Q5VUE5 145 aa25.47■■□□□ 1.67
CHKA-206ENST00000531341 MAFAQ8NHW3 353 aaPredicted RBP25.47■■□□□ 1.67
CHKA-206ENST00000531341 FBXO28Q9NVF7 368 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms