RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 NAPBQ9H115 298 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 HELLSQ9NRZ9 838 aa13.09□□□□□ -0.31
CAPN1-221ENST00000531068 SMIM22K7EJ46 135 aa13.08□□□□□ -0.32
CAPN1-221ENST00000531068 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
CAPN1-221ENST00000531068 ELNP15502 786 aa13.08□□□□□ -0.32
CAPN1-221ENST00000531068 GJA8P48165 433 aa13.08□□□□□ -0.32
CAPN1-221ENST00000531068 PLEKHH3Q7Z736 793 aa13.08□□□□□ -0.32
CAPN1-221ENST00000531068 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
CAPN1-221ENST00000531068 EPB41L4AQ9HCS5 686 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-221ENST00000531068 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
CAPN1-221ENST00000531068 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
CAPN1-221ENST00000531068 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-221ENST00000531068 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
CAPN1-221ENST00000531068 HMGCRP04035 888 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 INHAP05111 366 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 RASA1P20936 1047 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 DSG3P32926 999 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 RGS2P41220 211 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 GPR142Q7Z601 462 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
CAPN1-221ENST00000531068 PEX10O60683 326 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 CNMDO75829 334 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 FLOT1O75955 427 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 SGPL1O95470 568 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 CYP2B6P20813 491 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 MORN1Q5T089 497 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 WDR78Q5VTH9 848 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 POTEEQ6S8J3 1075 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 PLEKHM2Q8IWE5 1019 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 UNC93B1Q9H1C4 597 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 PORCNQ9H237 461 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 SYNPO2Q9UMS6 1093 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
CAPN1-221ENST00000531068 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 STRNO43815 780 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 RAD21O60216 631 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 TFRCP02786 760 aaKnown RBP13.05□□□□□ -0.32
CAPN1-221ENST00000531068 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
CAPN1-221ENST00000531068 PPARAQ07869 468 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 MAP2K5Q13163 448 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 ALX1Q15699 326 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 PRPF38BQ5VTL8 546 aaKnown RBP13.05□□□□□ -0.32
CAPN1-221ENST00000531068 CLEC10AQ8IUN9 316 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
CAPN1-221ENST00000531068 USP6NLQ92738 828 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 MKL1Q969V6 931 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
CAPN1-221ENST00000531068 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-221ENST00000531068 BTBD7Q9P203 1132 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
CAPN1-221ENST00000531068 PRDM1O75626 825 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 TTLL1O95922 423 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 TSPY3P0CV98 308 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 TSPY8P0CW00 308 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-221ENST00000531068 PTPREP23469 700 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 PLS1Q14651 629 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 SHCBP1Q8NEM2 672 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 NEDD1Q8NHV4 660 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 DEFB118Q96PH6 123 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 SPATC1LQ9H0A9 340 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 MROH8Q9H579 483 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-221ENST00000531068 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
CAPN1-221ENST00000531068 HTTP42858 3142 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 F5H6K3 240 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 HIP1O00291 1037 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 SLC25A27O95847 323 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 SDSP20132 328 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 TFAP4Q01664 338 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 KLRC3Q07444 240 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 MFSD14CQ5VZR4 134 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 ATG4CQ96DT6 458 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 APBA2Q99767 749 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 MOV10L1Q9BXT6 1211 aaKnown RBP13.03□□□□□ -0.32
CAPN1-221ENST00000531068 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
CAPN1-221ENST00000531068 MTMR4Q9NYA4 1195 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 ANAPC4Q9UJX5 808 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 SIPA1L1O43166 1804 aa13.03□□□□□ -0.32
CAPN1-221ENST00000531068 HOXC6P09630 235 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 ERCC3P19447 782 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 COPB2P35606 906 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-221ENST00000531068 DPP9Q86TI2 863 aa13.02□□□□□ -0.33
CAPN1-221ENST00000531068 ABRAQ8N0Z2 381 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms