RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SIAH1Q8IUQ4 282 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 AMOTL1Q8IY63 956 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 CCDC17Q96LX7 622 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 OGDHLQ9ULD0 1010 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 SLC4A4Q9Y6R1 1079 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 RLFQ13129 1914 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 RANBP2P49792 3224 aaKnown RBP18.99■□□□□ 0.63
CPSF1-205ENST00000531042 SLC15A5A6NIM6 579 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 PTPREP23469 700 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 KIAA1755Q5JYT7 1200 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 WDR78Q5VTH9 848 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 C16orf86Q6ZW13 317 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 DDRGK1Q96HY6 314 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 HOXC10Q9NYD6 342 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 RBM27Q9P2N5 1060 aaKnown RBP18.99■□□□□ 0.63
CPSF1-205ENST00000531042 TMX2Q9Y320 296 aa18.99■□□□□ 0.63
CPSF1-205ENST00000531042 ICA1Q05084 483 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 CLEC10AQ8IUN9 316 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 TANGO6Q9C0B7 1094 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 NBPF3Q9H094 633 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 PRO3102Q9H379 93 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 ARHGEF10LQ9HCE6 1279 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 TRIOBPQ9H2D6 2365 aa18.98■□□□□ 0.63
CPSF1-205ENST00000531042 A0A0G2JMZ2 1700 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 CCND3P30281 292 aaPredicted RBP18.97■□□□□ 0.63
CPSF1-205ENST00000531042 GRB14Q14449 540 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 KBTBD3Q8NAB2 608 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 LPAR1Q92633 364 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 GPATCH3Q96I76 525 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 SH2D4AQ9H788 454 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 IVNS1ABPQ9Y6Y0 642 aa18.97■□□□□ 0.63
CPSF1-205ENST00000531042 HOXC6P09630 235 aa18.96■□□□□ 0.63
CPSF1-205ENST00000531042 LHX8Q68G74 356 aa18.96■□□□□ 0.63
CPSF1-205ENST00000531042 STRBPQ96SI9 672 aaKnown RBP18.96■□□□□ 0.63
CPSF1-205ENST00000531042 MOV10L1Q9BXT6 1211 aaKnown RBP18.96■□□□□ 0.63
CPSF1-205ENST00000531042 C11orf49Q9H6J7 331 aa18.96■□□□□ 0.63
CPSF1-205ENST00000531042 VCPKMTQ9H867 229 aa18.96■□□□□ 0.63
CPSF1-205ENST00000531042 FLRT1Q9NZU1 646 aa18.96■□□□□ 0.63
CPSF1-205ENST00000531042 DSG3P32926 999 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 MFSD14CQ5VZR4 134 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 SPICE1Q8N0Z3 855 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 NPLOC4Q8TAT6 608 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 SPATC1LQ9H0A9 340 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 ARPP21Q9UBL0 812 aaPredicted RBP18.95■□□□□ 0.62
CPSF1-205ENST00000531042 PARP14Q460N5 1801 aa18.95■□□□□ 0.62
CPSF1-205ENST00000531042 GSG1L2A8MUP6 293 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 WDR46O15213 610 aaKnown RBP18.94■□□□□ 0.62
CPSF1-205ENST00000531042 EEF2P13639 858 aaKnown RBP18.94■□□□□ 0.62
CPSF1-205ENST00000531042 SBK1Q52WX2 424 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 MB21D1Q8N884 522 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 SHCBP1Q8NEM2 672 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 OSBP2Q969R2 916 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 KANSL2Q9H9L4 492 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 FRMPD3Q5JV73 1810 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 ZNF236Q9UL36 1845 aa18.94■□□□□ 0.62
CPSF1-205ENST00000531042 RNF113AO15541 343 aaKnown RBP18.93■□□□□ 0.62
CPSF1-205ENST00000531042 STRNO43815 780 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 FLOT1O75955 427 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 ATP2B2Q01814 1243 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 GIMAP6Q6P9H5 292 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 C7orf61Q8IZ16 206 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 APPBP2Q92624 585 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 PFASO15067 1338 aa18.93■□□□□ 0.62
CPSF1-205ENST00000531042 IGHA2P01877 340 aa18.92■□□□□ 0.62
CPSF1-205ENST00000531042 ZFYP08048 801 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-205ENST00000531042 COL6A1P12109 1028 aa18.92■□□□□ 0.62
CPSF1-205ENST00000531042 ERCC3P19447 782 aa18.92■□□□□ 0.62
CPSF1-205ENST00000531042 ADORA2AP29274 412 aa18.92■□□□□ 0.62
CPSF1-205ENST00000531042 DPP9Q86TI2 863 aa18.92■□□□□ 0.62
CPSF1-205ENST00000531042 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
CPSF1-205ENST00000531042 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-205ENST00000531042 SZT2Q5T011 3432 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 CYP2C19P33261 490 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 PLS1Q14651 629 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.91■□□□□ 0.624e-6■■■■■ 36.3
CPSF1-205ENST00000531042 MROH8Q9H579 483 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 STAP2Q9UGK3 403 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 ADAMTS5Q9UNA0 930 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 TTC41PQ6P2S7 1318 aa18.91■□□□□ 0.62
CPSF1-205ENST00000531042 A0A1W2PPC1 479 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 GPAA1O43292 621 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 RASA1P20936 1047 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 OLFML2BQ68BL8 750 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-205ENST00000531042 NCAPG2Q86XI2 1143 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 GOPCQ9HD26 462 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
CPSF1-205ENST00000531042 COL11A1P12107 1806 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-205ENST00000531042 ROBO3Q96MS0 1386 aa18.9■□□□□ 0.62
CPSF1-205ENST00000531042 DNAH12Q6ZR08 3092 aa18.89■□□□□ 0.62
CPSF1-205ENST00000531042 MINDY4BA8MYZ0 360 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 M0R2C6 588 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 COBLO75128 1261 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 GNAT2P19087 354 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 CNGA1P29973 690 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 STK11IPQ8N1F8 1099 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms