RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ATP5JP18859 108 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 CCT6AP40227 531 aaKnown RBP15.84■□□□□ 0.13
PCF11-204ENST00000530660 KIF23Q02241 960 aaPredicted RBP15.84■□□□□ 0.13
PCF11-204ENST00000530660 MIS18BP1Q6P0N0 1132 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 TMTC1Q8IUR5 882 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 CNGA4Q8IV77 575 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 AIFM3Q96NN9 605 aa15.84■□□□□ 0.13
PCF11-204ENST00000530660 A6NNZ2 444 aa15.83■□□□□ 0.13
PCF11-204ENST00000530660 PSMD14O00487 310 aa15.83■□□□□ 0.13
PCF11-204ENST00000530660 PBX1P40424 430 aa15.83■□□□□ 0.13
PCF11-204ENST00000530660 MDM2Q00987 491 aaPredicted RBP15.83■□□□□ 0.13
PCF11-204ENST00000530660 EXOSC10Q01780 885 aaKnown RBP15.83■□□□□ 0.13
PCF11-204ENST00000530660 TUBB8Q3ZCM7 444 aa15.83■□□□□ 0.13
PCF11-204ENST00000530660 BRAPQ7Z569 592 aa15.83■□□□□ 0.13
PCF11-204ENST00000530660 SUCLG2Q96I99 432 aa15.83■□□□□ 0.13
PCF11-204ENST00000530660 ACTR5Q9H9F9 607 aaPredicted RBP15.83■□□□□ 0.13
PCF11-204ENST00000530660 ADD3Q9UEY8 706 aaKnown RBP15.83■□□□□ 0.13
PCF11-204ENST00000530660 NR1D1P20393 614 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 SCTRP47872 440 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 KDM7AQ6ZMT4 941 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 ABHD10Q9NUJ1 306 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 ATP6V1G2O95670 118 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 QPCTQ16769 361 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 RESP18Q5W5W9 173 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 FAM210AQ96ND0 272 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 SPAG5Q96R06 1193 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 NUP88Q99567 741 aaPredicted RBP15.83■□□□□ 0.12
PCF11-204ENST00000530660 LGR6Q9HBX8 967 aa15.83■□□□□ 0.12
PCF11-204ENST00000530660 MGRN1O60291 552 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 DRP2Q13474 957 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 POSTNQ15063 836 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 KAZALD1Q96I82 304 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 G3BP2Q9UN86 482 aaKnown RBP15.82■□□□□ 0.12
PCF11-204ENST00000530660 FMN2Q9NZ56 1722 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 ZNF233A6NK53 670 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 HPDP32754 393 aaPredicted RBP15.82■□□□□ 0.12
PCF11-204ENST00000530660 MDH1P40925 334 aaKnown RBP15.82■□□□□ 0.12
PCF11-204ENST00000530660 CCDC122Q5T0U0 273 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 PAPD7Q5XG87 772 aaKnown RBP15.82■□□□□ 0.12
PCF11-204ENST00000530660 MLKLQ8NB16 471 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 JADE2Q9NQC1 790 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 BATF3Q9NR55 127 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 LAMA4Q16363 1823 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 NALCNQ8IZF0 1738 aa15.82■□□□□ 0.12
PCF11-204ENST00000530660 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 KIF4AO95239 1232 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 CKAP4Q07065 602 aaKnown RBP15.81■□□□□ 0.12
PCF11-204ENST00000530660 PROSER3Q2NL68 480 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 HIBCHQ6NVY1 386 aaPredicted RBP15.81■□□□□ 0.12
PCF11-204ENST00000530660 CYP26C1Q6V0L0 522 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 ZNF609O15014 1411 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 ROBO2Q9HCK4 1378 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 NRXN3Q9Y4C0 1643 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 SMNDC1O75940 238 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCF11-204ENST00000530660 ANP32DO95626 131 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 SLC5A9Q2M3M2 681 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 EPN1Q9Y6I3 576 aaPredicted RBP15.81■□□□□ 0.12
PCF11-204ENST00000530660 ELF3P78545 371 aaPredicted RBP15.81■□□□□ 0.12
PCF11-204ENST00000530660 PTPAQ15257 358 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 ALS2CLQ60I27 953 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 BABAM1Q9NWV8 329 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 SMARCAL1Q9NZC9 954 aa15.81■□□□□ 0.12
PCF11-204ENST00000530660 NDUFA10O95299 355 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 HMGB1P09429 215 aaKnown RBP15.8■□□□□ 0.12
PCF11-204ENST00000530660 CUL5Q93034 780 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 ZNF274Q96GC6 653 aaPredicted RBP15.8■□□□□ 0.12
PCF11-204ENST00000530660 RPGRIP1Q96KN7 1286 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 ZNF570Q96NI8 536 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 AGXT2Q9BYV1 514 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 KRT9P35527 623 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 GRIN1Q05586 938 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 XRCC4Q13426 336 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 MORC3Q14149 939 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 CCDC43Q96MW1 224 aaKnown RBP15.8■□□□□ 0.12
PCF11-204ENST00000530660 ZCWPW1Q9H0M4 648 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 SERTAD1Q9UHV2 236 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 C15orf41Q9Y2V0 281 aa15.8■□□□□ 0.12
PCF11-204ENST00000530660 POLR2DO15514 142 aaKnown RBP15.79■□□□□ 0.12
PCF11-204ENST00000530660 PPP1R7Q15435 360 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 SMYD4Q8IYR2 804 aaPredicted RBP15.79■□□□□ 0.12
PCF11-204ENST00000530660 EBF2Q9HAK2 575 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
PCF11-204ENST00000530660 DUSP10Q9Y6W6 482 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 CEMIPQ8WUJ3 1361 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
PCF11-204ENST00000530660 E7EWF7 191 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 FECHP22830 423 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCF11-204ENST00000530660 TCP11Q8WWU5 503 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 LEMD3Q9Y2U8 911 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 EPHB4P54760 987 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 CCDC70Q6NSX1 233 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 TRIM74Q86UV6 250 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 TRIM73Q86UV7 250 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 PSMB7Q99436 277 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 HOMER3Q9NSC5 361 aa15.79■□□□□ 0.12
PCF11-204ENST00000530660 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
PCF11-204ENST00000530660 PLCD1P51178 756 aa15.78■□□□□ 0.12
PCF11-204ENST00000530660 GNPTABQ3T906 1256 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms