RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ALPK1Q96QP1 1244 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 KRTAP4-12Q9BQ66 201 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 CNNM2Q9H8M5 875 aa7.9□□□□□ -1.14
USP47-209ENST00000530041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
USP47-209ENST00000530041 SCAMP3O14828 347 aaKnown RBP7.89□□□□□ -1.15
USP47-209ENST00000530041 GDNFP39905 211 aa7.89□□□□□ -1.15
USP47-209ENST00000530041 LRRFIP1Q32MZ4 808 aaKnown RBP7.89□□□□□ -1.15
USP47-209ENST00000530041 CREG2Q8IUH2 290 aa7.89□□□□□ -1.15
USP47-209ENST00000530041 ATG4CQ96DT6 458 aa7.89□□□□□ -1.15
USP47-209ENST00000530041 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP47-209ENST00000530041 GOLGA2P5Q9HBQ8 144 aa7.89□□□□□ -1.15
USP47-209ENST00000530041 C19orf73Q9NVV2 129 aa7.89□□□□□ -1.15
USP47-209ENST00000530041 PCDHGB7Q9Y5F8 929 aa7.89□□□□□ -1.15
USP47-209ENST00000530041 MEIS3P2A8K0S8 358 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 AFMP43652 599 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 RNF4P78317 190 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 OGFOD2Q6N063 350 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 NLRC3Q7RTR2 1065 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 ZSWIM9Q86XI8 627 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 SLAMF8Q9P0V8 285 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 DUSP13Q9UII6 198 aa7.88□□□□□ -1.15
USP47-209ENST00000530041 DDX41Q9UJV9 622 aaKnown RBP7.88□□□□□ -1.15
USP47-209ENST00000530041 CCNFP41002 786 aa7.87□□□□□ -1.15
USP47-209ENST00000530041 RACK1P63244 317 aaKnown RBP7.87□□□□□ -1.15
USP47-209ENST00000530041 RAD51AP2Q09MP3 1159 aa7.87□□□□□ -1.15
USP47-209ENST00000530041 NME1P15531 152 aaKnown RBP7.86□□□□□ -1.15
USP47-209ENST00000530041 POLR2BP30876 1174 aaKnown RBP7.86□□□□□ -1.15
USP47-209ENST00000530041 MRRFQ96E11 262 aaKnown RBP7.86□□□□□ -1.15
USP47-209ENST00000530041 ANTXR1Q9H6X2 564 aa7.86□□□□□ -1.15
USP47-209ENST00000530041 TMEM59LQ9UK28 342 aa7.86□□□□□ -1.15
USP47-209ENST00000530041 DNAJC25-GNG10A0A024R161 153 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 TNFRSF10CO14798 259 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 EGR3Q06889 387 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 KCNMB1Q16558 191 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 RALGPS1Q5JS13 557 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
USP47-209ENST00000530041 FYB2Q5VWT5 728 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 TTC6Q86TZ1 520 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 POU5F2Q8N7G0 328 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 ENOX1Q8TC92 643 aaKnown RBP7.85□□□□□ -1.15
USP47-209ENST00000530041 ZNRF3Q9ULT6 936 aa7.85□□□□□ -1.15
USP47-209ENST00000530041 SHISA3A0PJX4 238 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 IMPDH2P12268 514 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 LTKP29376 864 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 CLEC16AQ2KHT3 1053 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
USP47-209ENST00000530041 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 ZNF654Q8IZM8 581 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 KIRREL1Q96J84 757 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
USP47-209ENST00000530041 PCDHA11Q9Y5I1 949 aa7.84□□□□□ -1.15
USP47-209ENST00000530041 CLEC3AO75596 197 aa7.83□□□□□ -1.16
USP47-209ENST00000530041 NMIQ13287 307 aaPredicted RBP7.83□□□□□ -1.16
USP47-209ENST00000530041 NBPF9Q3BBW0 867 aa7.83□□□□□ -1.16
USP47-209ENST00000530041 ADAMTS10Q9H324 1103 aa7.83□□□□□ -1.16
USP47-209ENST00000530041 ZNF503-AS2A6NEH8 195 aa7.82□□□□□ -1.16
USP47-209ENST00000530041 GLI1P08151 1106 aa7.82□□□□□ -1.16
USP47-209ENST00000530041 RAC2P15153 192 aa7.82□□□□□ -1.16
USP47-209ENST00000530041 INTS3Q68E01 1043 aaKnown RBP7.82□□□□□ -1.16
USP47-209ENST00000530041 TMEM192Q8IY95 271 aa7.82□□□□□ -1.16
USP47-209ENST00000530041 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
USP47-209ENST00000530041 SLC9A7Q96T83 725 aa7.82□□□□□ -1.16
USP47-209ENST00000530041 FAM53CQ9NYF3 392 aa7.82□□□□□ -1.16
USP47-209ENST00000530041 KIAA1522Q9P206 1035 aaPredicted RBP7.82□□□□□ -1.16
USP47-209ENST00000530041 UNCXA6NJT0 531 aa7.81□□□□□ -1.16
USP47-209ENST00000530041 HK2P52789 917 aa7.81□□□□□ -1.16
USP47-209ENST00000530041 TMEM67Q5HYA8 995 aa7.81□□□□□ -1.16
USP47-209ENST00000530041 FERD3LQ96RJ6 166 aa7.81□□□□□ -1.16
USP47-209ENST00000530041 HDAC8Q9BY41 377 aa7.81□□□□□ -1.16
USP47-209ENST00000530041 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 HPXP02790 462 aa7.8□□□□□ -1.16
USP47-209ENST00000530041 YBX3P16989 372 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP47-209ENST00000530041 HDLBPQ00341 1268 aaKnown RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 COL9A2Q14055 689 aaPredicted RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 TMC3Q7Z5M5 1100 aa7.8□□□□□ -1.16
USP47-209ENST00000530041 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 DAGLBQ8NCG7 672 aa7.8□□□□□ -1.16
USP47-209ENST00000530041 DHX38Q92620 1227 aaKnown RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 ZNF512BQ96KM6 892 aaPredicted RBP7.8□□□□□ -1.16
USP47-209ENST00000530041 SLC6A18Q96N87 628 aa7.8□□□□□ -1.16
USP47-209ENST00000530041 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP47-209ENST00000530041 LRRC10BA6NIK2 292 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
USP47-209ENST00000530041 ZGLP1P0C6A0 271 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 ACRP10323 421 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 ERVFC1P60507 584 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 TEKQ02763 1124 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 PAK2Q13177 524 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 SNW1Q13573 536 aaKnown RBP7.79□□□□□ -1.16
USP47-209ENST00000530041 NT5DC4Q86YG4 428 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
USP47-209ENST00000530041 RBBP8NLQ8NC74 664 aaPredicted RBP7.79□□□□□ -1.16
USP47-209ENST00000530041 PDZD8Q8NEN9 1154 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 ABHD4Q8TB40 342 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 MYLIPQ8WY64 445 aa7.79□□□□□ -1.16
USP47-209ENST00000530041 LIN37Q96GY3 246 aaPredicted RBP7.79□□□□□ -1.16
USP47-209ENST00000530041 DHRS1Q96LJ7 313 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms