RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 SLC17A8Q8NDX2 589 aa14.64□□□□□ -0.07
USH1C-208ENST00000529563 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
USH1C-208ENST00000529563 BOLA2Q9H3K6 86 aa14.64□□□□□ -0.07
USH1C-208ENST00000529563 DCP1AQ9NPI6 582 aaPredicted RBP14.64□□□□□ -0.07
USH1C-208ENST00000529563 DDX20Q9UHI6 824 aaKnown RBP14.64□□□□□ -0.07
USH1C-208ENST00000529563 ALPK3Q96L96 1907 aa14.64□□□□□ -0.07
USH1C-208ENST00000529563 PFASO15067 1338 aa14.64□□□□□ -0.07
USH1C-208ENST00000529563 RANBP2P49792 3224 aaKnown RBP14.64□□□□□ -0.07
USH1C-208ENST00000529563 FLOT1O75955 427 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 MBD4O95243 580 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 CYP2D6P10635 497 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 CYP2C19P33261 490 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 ICA1Q05084 483 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 GRB14Q14449 540 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 LHX8Q68G74 356 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 POTEEQ6S8J3 1075 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 NCAPG2Q86XI2 1143 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 TDHQ8IZJ6 230 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 DYNLL2Q96FJ2 89 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 FLRT1Q9NZU1 646 aa14.63□□□□□ -0.07
USH1C-208ENST00000529563 STRNO43815 780 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 ADORA2AP29274 412 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 ATN1P54259 1190 aaPredicted RBP14.62□□□□□ -0.07
USH1C-208ENST00000529563 RRP1P56182 461 aaKnown RBP14.62□□□□□ -0.07
USH1C-208ENST00000529563 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
USH1C-208ENST00000529563 GABPAQ06546 454 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 LRRC26Q2I0M4 334 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 DEFB123Q8N688 67 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 SLC44A5Q8NCS7 719 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 MOV10L1Q9BXT6 1211 aaKnown RBP14.62□□□□□ -0.07
USH1C-208ENST00000529563 SPATC1LQ9H0A9 340 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 ATP8A2Q9NTI2 1148 aa14.62□□□□□ -0.07
USH1C-208ENST00000529563 A0A1W2PRG0 241 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 KBTBD13C9JR72 458 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 PRKAB2O43741 272 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 HOXC6P09630 235 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 COL6A1P12109 1028 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 ERCC3P19447 782 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 EVX2Q03828 476 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 ARRDC4Q8NCT1 418 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 NPLOC4Q8TAT6 608 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 LPAR1Q92633 364 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 CCDC17Q96LX7 622 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 SLC4A4Q9Y6R1 1079 aa14.61□□□□□ -0.07
USH1C-208ENST00000529563 SZT2Q5T011 3432 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 TCRBV5S4A2TA0A5A2 114 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
USH1C-208ENST00000529563 AKR1B1P15121 316 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 ATP5JP18859 108 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 ADD2P35612 726 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 SHCBP1Q8NEM2 672 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 MROH8Q9H579 483 aa14.6□□□□□ -0.07
USH1C-208ENST00000529563 DNM1LO00429 736 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 WDR46O15213 610 aaKnown RBP14.59□□□□□ -0.07
USH1C-208ENST00000529563 FCER1AP12319 257 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 DSG3P32926 999 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 CDK8P49336 464 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
USH1C-208ENST00000529563 ANO1Q5XXA6 986 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 OLFML2BQ68BL8 750 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 CLEC10AQ8IUN9 316 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 HAUS7Q99871 368 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 LRRCC1Q9C099 1032 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 VCPKMTQ9H867 229 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 GOPCQ9HD26 462 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 ATP11BQ9Y2G3 1177 aa14.59□□□□□ -0.07
USH1C-208ENST00000529563 CYP2D7A0A087X1C5 515 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 USP17L12C9JPN9 530 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 USP17L21D6R901 530 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 LRIT3Q3SXY7 679 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 SLFNL1Q499Z3 407 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 GPR153Q6NV75 609 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 GPATCH3Q96I76 525 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 PRDM5Q9NQX1 630 aaPredicted RBP14.58□□□□□ -0.08
USH1C-208ENST00000529563 TMX2Q9Y320 296 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 CTDP1Q9Y5B0 961 aaPredicted RBP14.58□□□□□ -0.08
USH1C-208ENST00000529563 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.08
USH1C-208ENST00000529563 MYH8P13535 1937 aa14.58□□□□□ -0.08
USH1C-208ENST00000529563 SLC25A27O95847 323 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 CYBAP13498 195 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 RTP1P59025 263 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 UBE3CQ15386 1083 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 C12orf60Q5U649 245 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 Q7L0L9 218 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 MMP19Q99542 508 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 KANSL2Q9H9L4 492 aa14.57□□□□□ -0.08
USH1C-208ENST00000529563 SEPT4O43236 478 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 COBLO75128 1261 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 EEF2P13639 858 aaKnown RBP14.56□□□□□ -0.08
USH1C-208ENST00000529563 KCTD2Q14681 263 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
USH1C-208ENST00000529563 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms