RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 GPRASP2Q96D09 838 aa7.58□□□□□ -1.2
CSDE1-212ENST00000529046 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
CSDE1-212ENST00000529046 EHMT1Q9H9B1 1298 aa7.58□□□□□ -1.2
CSDE1-212ENST00000529046 ADAM30Q9UKF2 790 aa7.58□□□□□ -1.2
CSDE1-212ENST00000529046 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
CSDE1-212ENST00000529046 ABCA5Q8WWZ7 1642 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 FAM155AB1AL88 458 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-212ENST00000529046 TNNI2P48788 182 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 APOBRQ0VD83 1088 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 CWF19L2Q2TBE0 894 aaKnown RBP7.57□□□□□ -1.2
CSDE1-212ENST00000529046 TMEM201Q5SNT2 666 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 C22orf34Q6ZV56 151 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 MFSD4AQ8N468 514 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 RIN3Q8TB24 985 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
CSDE1-212ENST00000529046 DPH2Q9BQC3 489 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-212ENST00000529046 PRR33A8MZF0 331 aa7.56□□□□□ -1.2
CSDE1-212ENST00000529046 ZNF865P0CJ78 1059 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-212ENST00000529046 JUNBP17275 347 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-212ENST00000529046 ITGB5P18084 799 aa7.56□□□□□ -1.2
CSDE1-212ENST00000529046 CYP7A1P22680 504 aa7.56□□□□□ -1.2
CSDE1-212ENST00000529046 IKZF1Q13422 519 aa7.56□□□□□ -1.2
CSDE1-212ENST00000529046 SEC16BQ96JE7 1060 aa7.56□□□□□ -1.2
CSDE1-212ENST00000529046 FMNL2Q96PY5 1086 aa7.56□□□□□ -1.2
CSDE1-212ENST00000529046 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
CSDE1-212ENST00000529046 PITPNM2Q9BZ72 1349 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 CNTNAP4Q9C0A0 1308 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
CSDE1-212ENST00000529046 PLCG1P19174 1290 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 MCATQ8IVS2 390 aaKnown RBP7.55□□□□□ -1.2
CSDE1-212ENST00000529046 NKD1Q969G9 470 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 ACSF2Q96CM8 615 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-212ENST00000529046 COX4I2Q96KJ9 171 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
CSDE1-212ENST00000529046 ADAMTS6Q9UKP5 1117 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 CORINQ9Y5Q5 1042 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 TOP2BQ02880 1626 aa7.55□□□□□ -1.2
CSDE1-212ENST00000529046 NUP160Q12769 1436 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 BIN1O00499 593 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 CBX7O95931 251 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 ATF4P18848 351 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-212ENST00000529046 TXKP42681 527 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 CDKAL1Q5VV42 579 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 SLC23A3Q6PIS1 610 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 CDH24Q86UP0 819 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 ASIC4Q96FT7 647 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 HSPA12BQ96MM6 686 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 BRMS1Q9HCU9 246 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 INPP5FQ9Y2H2 1132 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 CAPN6Q9Y6Q1 641 aa7.54□□□□□ -1.2
CSDE1-212ENST00000529046 FHAD1B1AJZ9 1412 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 BIVM-ERCC5R4GMW8 1640 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 MEIS3P2A8K0S8 358 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 ETV3P41162 512 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 KIR3DL1P43629 444 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 ZP2Q05996 745 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 SEZ6Q53EL9 994 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 RBBP8NLQ8NC74 664 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-212ENST00000529046 LRRN4CLQ8ND94 238 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 FAM13CQ8NE31 585 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 ZNRF3Q9ULT6 936 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 GRIN2AQ12879 1464 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 PBRM1Q86U86 1689 aa7.53□□□□□ -1.2
CSDE1-212ENST00000529046 ERICH3Q5RHP9 1530 aa7.52□□□□□ -1.2
CSDE1-212ENST00000529046 H3BS24 57 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
CSDE1-212ENST00000529046 HTR3BO95264 441 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 PAPLNO95428 1278 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 FGRP09769 529 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 ZNF165P49910 485 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 YARSP54577 528 aaKnown RBP7.52□□□□□ -1.21
CSDE1-212ENST00000529046 NAALADL2Q58DX5 795 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 GINM1Q9NU53 330 aa7.52□□□□□ -1.21
CSDE1-212ENST00000529046 CLCQ05315 142 aa7.51□□□□□ -1.21
CSDE1-212ENST00000529046 GNL2Q13823 731 aaKnown RBP7.51□□□□□ -1.21
CSDE1-212ENST00000529046 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-212ENST00000529046 CYB5D2Q8WUJ1 264 aa7.51□□□□□ -1.21
CSDE1-212ENST00000529046 CAPN10Q9HC96 672 aa7.51□□□□□ -1.21
CSDE1-212ENST00000529046 ATP13A1Q9HD20 1204 aa7.51□□□□□ -1.21
CSDE1-212ENST00000529046 PCDHB14Q9Y5E9 798 aa7.51□□□□□ -1.21
CSDE1-212ENST00000529046 ST14Q9Y5Y6 855 aa7.51□□□□□ -1.21
CSDE1-212ENST00000529046 GRIN3BO60391 1043 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 DNAJA2O60884 412 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 IMPDH2P12268 514 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 TNK2Q07912 1038 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 THAP5Q7Z6K1 395 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 SLFN12Q8IYM2 578 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 DNAJB8Q8NHS0 232 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
CSDE1-212ENST00000529046 LMCD1Q9NZU5 365 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 REV1Q9UBZ9 1251 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 STRIP2Q9ULQ0 834 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 CEP131Q9UPN4 1083 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 EFR3BQ9Y2G0 817 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 ADAMTS12P58397 1594 aa7.5□□□□□ -1.21
CSDE1-212ENST00000529046 UPK3BL1B0FP48 263 aa7.49□□□□□ -1.21
CSDE1-212ENST00000529046 UPK3BL2E5RIL1 263 aa7.49□□□□□ -1.21
CSDE1-212ENST00000529046 PIWIL2Q8TC59 973 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms