RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 FAM151AQ8WW52 585 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 ABHD8Q96I13 439 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-218ENST00000528877 HMG20BQ9P0W2 317 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 SNCAIPQ9Y6H5 919 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 FPGT-TNNI3KV9GXZ4 949 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 MROH7-TTC4A0A0A0MT08 1334 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 MYH2Q9UKX2 1941 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-218ENST00000528877 ENTPD3O75355 529 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 MCAMP43121 646 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 NFIAQ12857 509 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 NOL9Q5SY16 702 aaKnown RBP8.67□□□□□ -1.02
ITGB1-218ENST00000528877 DCAF15Q66K64 600 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 VASH1Q7L8A9 365 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-218ENST00000528877 PANK1Q8TE04 598 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 ZNF384Q8TF68 577 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 KIFC2Q96AC6 838 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 MCOLN1Q9GZU1 580 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 ATP13A2Q9NQ11 1180 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 ZNF112Q9UJU3 913 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 RCAN3Q9UKA8 241 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 CASP8AP2Q9UKL3 1982 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
ITGB1-218ENST00000528877 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 GPR75-ASB3A0A0A6YYF3 556 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 IGF2BP3O00425 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 WDHD1O75717 1129 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 RHBDL3P58872 404 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 MAP3K10Q02779 954 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 MECOMQ03112 1051 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 TMED8Q6PL24 325 aaPredicted RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 CTU1Q7Z7A3 348 aaKnown RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 ERC1Q8IUD2 1116 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 OPTNQ96CV9 577 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 WRNIP1Q96S55 665 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 ZNF341Q9BYN7 854 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 ELP3Q9H9T3 547 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 ZCCHC17Q9NP64 241 aaKnown RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 DBNLQ9UJU6 430 aaKnown RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 CSADQ9Y600 493 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 CENPFP49454 3210 aa8.66□□□□□ -1.02
ITGB1-218ENST00000528877 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
ITGB1-218ENST00000528877 GPR25O00155 361 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 WIPF1O43516 503 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 BTDP43251 543 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 RGS3P49796 1198 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 GTF2A2P52657 109 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 GSTO1P78417 241 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 PPIL2Q13356 520 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 PDE3AQ14432 1141 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 HSP90AB4PQ58FF6 505 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 GORABQ5T7V8 394 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 ERICH6Q7L0X2 663 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 ERO1BQ86YB8 467 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 RPAP2Q8IXW5 612 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-218ENST00000528877 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-218ENST00000528877 BRI3BPQ8WY22 251 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 NEUROD6Q96NK8 337 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 DBNDD2Q9BQY9 259 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 CHMP4BQ9H444 224 aaKnown RBP8.65□□□□□ -1.02
ITGB1-218ENST00000528877 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 USP40Q9NVE5 1235 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 ABCF2Q9UG63 623 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 DOCK1Q14185 1865 aa8.65□□□□□ -1.02
ITGB1-218ENST00000528877 TNRC18O15417 2968 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-218ENST00000528877 BRCA2P51587 3418 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 GRM5P41594 1212 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
ITGB1-218ENST00000528877 PPATQ06203 517 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 OS9Q13438 667 aaPredicted RBP8.64□□□□□ -1.03
ITGB1-218ENST00000528877 DGKZQ13574 1117 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 PKN2Q16513 984 aaKnown RBP8.64□□□□□ -1.03
ITGB1-218ENST00000528877 CCDC158Q5M9N0 1113 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 OTUD7BQ6GQQ9 843 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 EAF2Q96CJ1 260 aaPredicted RBP8.64□□□□□ -1.03
ITGB1-218ENST00000528877 PTPN18Q99952 460 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 DDX4Q9NQI0 724 aaKnown RBP8.64□□□□□ -1.03
ITGB1-218ENST00000528877 TLR7Q9NYK1 1049 aaKnown RBP8.64□□□□□ -1.03
ITGB1-218ENST00000528877 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 SIPA1L1O43166 1804 aa8.64□□□□□ -1.03
ITGB1-218ENST00000528877 CCL15-CCL14A0A0B4J2E2 113 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 PHF20L1A8MW92 1017 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 FKTNO75072 461 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 HMMRO75330 724 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 TBC1D8O95759 1140 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-218ENST00000528877 LDHCP07864 332 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 CETPP11597 493 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 FSHRP23945 695 aa8.63□□□□□ -1.03
ITGB1-218ENST00000528877 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms