RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MNS1Q8NEH6 495 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 DHX58Q96C10 678 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 NSUN4Q96CB9 384 aaKnown RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 ARGLU1Q9NWB6 273 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 MRFAP1Q9Y605 127 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
CSTF3-208ENST00000528865 SPATA31A1Q5TZJ5 1347 aa9.52□□□□□ -0.89
CSTF3-208ENST00000528865 DUOX1Q9NRD9 1551 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 DLEC1Q9Y238 1755 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 WNT7AO00755 349 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 PNMA6AP0CW24 399 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-208ENST00000528865 ATP2B1P20020 1258 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-208ENST00000528865 TUBB4BP68371 445 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 RBL2Q08999 1139 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 ZNF174Q15697 407 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 PFKFB3Q16875 520 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-208ENST00000528865 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 FILIP1LQ4L180 1135 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 CAVIN4Q5BKX8 364 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 PDXDC2PQ6P474 469 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 TMCO3Q6UWJ1 677 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-208ENST00000528865 IQUBQ8NA54 791 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 MARCH10Q8NA82 808 aaPredicted RBP9.51□□□□□ -0.89
CSTF3-208ENST00000528865 WDR24Q96S15 920 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 SH3GLB2Q9NR46 395 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 ATP8A2Q9NTI2 1148 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 ABCF2Q9UG63 623 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 RWDD2AQ9UIY3 292 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 XDHP47989 1333 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 PHLPP1O60346 1717 aa9.51□□□□□ -0.89
CSTF3-208ENST00000528865 COL16A1Q07092 1604 aaPredicted RBP9.5□□□□□ -0.89
CSTF3-208ENST00000528865 WNK3Q9BYP7 1800 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 CYP2D7A0A087X1C5 515 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 USP17L21D6R901 530 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 MFAP3LO75121 409 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 PRDM1O75626 825 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 CCDC175P0C221 793 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 SCG2P13521 617 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 LONP1P36776 959 aaKnown RBP9.5□□□□□ -0.89
CSTF3-208ENST00000528865 AFMP43652 599 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 SPAG1Q07617 926 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 PTGDRQ13258 359 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 DDB1Q16531 1140 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 IL17AQ16552 155 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 PTPN21Q16825 1174 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 JAKMIP3Q5VZ66 844 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 RAD9BQ6WBX8 426 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 C3orf67Q6ZVT6 689 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 TMTC1Q8IUR5 882 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 IGSF22Q8N9C0 903 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 CTCFLQ8NI51 663 aaPredicted RBP9.5□□□□□ -0.89
CSTF3-208ENST00000528865 MTRQ99707 1265 aa9.5□□□□□ -0.89
CSTF3-208ENST00000528865 MRPL44Q9H9J2 332 aaKnown RBP9.5□□□□□ -0.89
CSTF3-208ENST00000528865 DCP1AQ9NPI6 582 aaPredicted RBP9.5□□□□□ -0.89
CSTF3-208ENST00000528865 COL4A1P02462 1669 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 DOT1LQ8TEK3 1739 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 NPHP1O15259 732 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 ADAMTS2O95450 1211 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 CALML3P27482 149 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 COPB1P53618 953 aaKnown RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 PPP2R3AQ06190 1150 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 HSP90AA4PQ58FG1 418 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 CCDC178Q5BJE1 867 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 ZNF658Q5TYW1 1059 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 RCSD1Q6JBY9 416 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 DGKHQ86XP1 1220 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 CNGA4Q8IV77 575 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 MSL3Q8N5Y2 521 aaKnown RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 DAGLBQ8NCG7 672 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 CRNKL1Q9BZJ0 848 aaKnown RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 ANKRD2Q9GZV1 360 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 RMND1Q9NWS8 449 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 ARPP21Q9UBL0 812 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 MYH14Q7Z406 1995 aaKnown RBP9.49□□□□□ -0.89
CSTF3-208ENST00000528865 SYNRGQ9UMZ2 1314 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 IRS2Q9Y4H2 1338 aa9.49□□□□□ -0.89
CSTF3-208ENST00000528865 WTIPA6NIX2 430 aaPredicted RBP9.48□□□□□ -0.89
CSTF3-208ENST00000528865 SOWAHDA6NJG2 315 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 H7C1D1 291 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 M0R2N6 131 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 MYL1P05976 194 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 KIF5BP33176 963 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 STX17P56962 302 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 NLRP5P59047 1200 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 RPS8P62241 208 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms