RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	HOXA7	P31268	230 aa	Predicted RBP	9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	LBX1	P52954	281 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TAF1C	Q15572	869 aa	Predicted RBP	9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	GADL1	Q6ZQY3	521 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	KIAA1211	Q6ZU35	1233 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	NEDD1	Q8NHV4	660 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MKL1	Q969V6	931 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	RNF41	Q9H4P4	317 aa	Predicted RBP	9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SH2D4A	Q9H788	454 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ARHGEF10L	Q9HCE6	1279 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	NYAP2	Q9P242	653 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TMX2	Q9Y320	296 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TLR2	O60603	784 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	OSBP	P22059	807 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	HMGCS2	P54868	508 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TFAP4	Q01664	338 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CTDSPL2	Q05D32	466 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	IMMT	Q16891	758 aa	Known RBP	9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MFSD6	Q6ZSS7	791 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SIAH1	Q8IUQ4	282 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	STK11IP	Q8N1F8	1099 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	STAG1	Q8WVM7	1258 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MAP4K1	Q92918	833 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	EMILIN3	Q9NT22	766 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PNMA3	Q9UL41	463 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SYNPO2	Q9UMS6	1093 aa		9.19	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MYH1	P12882	1939 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MYH7	P12883	1935 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	IGKV6D-41	A0A0C4DH26	115 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CDC45	O75419	566 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TSPY3	P0CV98	308 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TSPY8	P0CW00	308 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ICA1	Q05084	483 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MTMR2	Q13614	643 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SHROOM1	Q2M3G4	852 aa	Predicted RBP	9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	VARS2	Q5ST30	1063 aa	Known RBP	9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	AKNAD1	Q5T1N1	836 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SKAP1	Q86WV1	359 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ACER1	Q8TDN7	264 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PARK7	Q99497	189 aa	Known RBP	9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ESYT1	Q9BSJ8	1104 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TCP11L1	Q9NUJ3	509 aa		9.18	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CDK5RAP2	Q96SN8	1893 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851		A0A1W2PRG0	241 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TSPY2	A6NKD2	308 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L15	C9J2P7	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L13	C9JLJ4	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L11	C9JVI0	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L18	D6R9N7	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L22	D6RA61	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L17	D6RBQ6	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L19	D6RCP7	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L20	D6RJB6	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	FKTN	O75072	461 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PRDM1	O75626	825 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	EEF2	P13639	858 aa	Known RBP	9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	USP17L24	Q0WX57	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CRHR2	Q13324	411 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ARHGEF6	Q15052	776 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CCDC178	Q5BJE1	867 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	C17orf99	Q6UX52	265 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	LPAR1	Q92633	364 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	FEZ1	Q99689	392 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	IL25	Q9H293	177 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	MTMR4	Q9NYA4	1195 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SIPA1L1	O43166	1804 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TTLL1	O95922	423 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	NOV	P48745	357 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	SP3	Q02447	781 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	PTH1R	Q03431	593 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TREML2	Q5T2D2	321 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CATSPERG	Q6ZRH7	1159 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ZNF296	Q8WUU4	475 aa	Predicted RBP	9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ESR2	Q92731	530 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TTC14	Q96N46	770 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	KRT23	Q9C075	422 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	R3HDML	Q9H3Y0	253 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	VCPKMT	Q9H867	229 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	INCENP	Q9NQS7	918 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	HOXC10	Q9NYD6	342 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CLIP2	Q9UDT6	1046 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TSKS	Q9UJT2	592 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TACC3	Q9Y6A5	838 aa		9.17	□□□□□ -0.94
MS4A6A-208	ENST00000528851	RANBP6	O60518	1105 aa	Known RBP	9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	GCLC	P48506	637 aa	Predicted RBP	9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	HAND2	P61296	217 aa		9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	FAM47A	Q5JRC9	791 aa		9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ERO1A	Q96HE7	468 aa		9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CNNM2	Q9H8M5	875 aa		9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	TOMM22	Q9NS69	142 aa		9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	OTOF	Q9HC10	1997 aa		9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	DDX60L	Q5H9U9	1706 aa	Known RBP	9.16	□□□□□ -0.94
MS4A6A-208	ENST00000528851	EPB41L2	O43491	1005 aa	Known RBP	9.15	□□□□□ -0.94
MS4A6A-208	ENST00000528851	CYP2C8	P10632	490 aa		9.15	□□□□□ -0.94
MS4A6A-208	ENST00000528851	IRX3	P78415	501 aa	Predicted RBP	9.15	□□□□□ -0.94
MS4A6A-208	ENST00000528851	ATP2B2	Q01814	1243 aa		9.15	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms