RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 USP17L13C9JLJ4 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L11C9JVI0 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L18D6R9N7 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L22D6RA61 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L17D6RBQ6 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L19D6RCP7 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L20D6RJB6 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 BCRP11274 1271 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 USP17L24Q0WX57 530 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 LRRC47Q8N1G4 583 aaKnown RBP20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 ANKRD13CQ8N6S4 541 aa20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 RNF41Q9H4P4 317 aaPredicted RBP20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 U3KPZ7 1027 aaPredicted RBP20.66■□□□□ 0.9
CHRDL2-206ENST00000528789 PEX10O60683 326 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 TTLL1O95922 423 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 CASC1Q6TDU7 716 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 CATSPERGQ6ZRH7 1159 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 KIAA1211Q6ZU35 1233 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 CTU1Q7Z7A3 348 aaKnown RBP20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 TNS4Q8IZW8 715 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 TANGO6Q9C0B7 1094 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 ARHGAP39Q9C0H5 1083 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 LSG1Q9H089 658 aaKnown RBP20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 GOPCQ9HD26 462 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 IL17RBQ9NRM6 502 aa20.65■□□□□ 0.9
CHRDL2-206ENST00000528789 HERVK_113P62684 666 aa20.64■□□□□ 0.89
CHRDL2-206ENST00000528789 LACTBP83111 547 aaPredicted RBP20.64■□□□□ 0.89
CHRDL2-206ENST00000528789 LPAR1Q92633 364 aa20.64■□□□□ 0.89
CHRDL2-206ENST00000528789 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
CHRDL2-206ENST00000528789 TRIM17Q9Y577 477 aa20.64■□□□□ 0.89
CHRDL2-206ENST00000528789 RBM8AQ9Y5S9 174 aaKnown RBP20.64■□□□□ 0.89
CHRDL2-206ENST00000528789 ZSWIM8A7E2V4 1837 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 CYP21A2P08686 494 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 PCP11498 1178 aaKnown RBP20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 MAP4K1Q92918 833 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 CHMP4CQ96CF2 233 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 NUP88Q99567 741 aaPredicted RBP20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 MCOLN1Q9GZU1 580 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 STX8Q9UNK0 236 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 MYH4Q9Y623 1939 aa20.63■□□□□ 0.89
CHRDL2-206ENST00000528789 B4E1Z4 1266 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 F5H6K3 240 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 NDUFB10O96000 172 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 CTGFP29279 349 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 GCLCP48506 637 aaPredicted RBP20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 KLRC3Q07444 240 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 KIF22Q14807 665 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 FAM83BQ5T0W9 1011 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 SAMD1Q6SPF0 538 aaPredicted RBP20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 ESR2Q92731 530 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 MKL1Q969V6 931 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 PAGR1Q9BTK6 254 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 EFCC1Q9HA90 598 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 TAF6LQ9Y6J9 622 aa20.62■□□□□ 0.89
CHRDL2-206ENST00000528789 WDR46O15213 610 aaKnown RBP20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 KDM4AO75164 1064 aa20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 POTEEQ6S8J3 1075 aa20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 ZKSCAN3Q9BRR0 538 aa20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 TXNRD2Q9NNW7 524 aa20.61■□□□□ 0.89
CHRDL2-206ENST00000528789 FLOT1O75955 427 aa20.6■□□□□ 0.89
CHRDL2-206ENST00000528789 PSMC4P43686 418 aa20.6■□□□□ 0.89
CHRDL2-206ENST00000528789 RBPJLQ9UBG7 517 aa20.6■□□□□ 0.89
CHRDL2-206ENST00000528789 MTMR7Q9Y216 660 aa20.6■□□□□ 0.89
CHRDL2-206ENST00000528789 SPDYE16A6NNV3 312 aaPredicted RBP20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 FMNL1O95466 1100 aaPredicted RBP20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 COG2Q14746 738 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 PPP4R3BQ5MIZ7 849 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 SLFN13Q68D06 897 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 TRIM47Q96LD4 638 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 KRT23Q9C075 422 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 TCP11L1Q9NUJ3 509 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 FBXO28Q9NVF7 368 aa20.59■□□□□ 0.89
CHRDL2-206ENST00000528789 CNMDO75829 334 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 FCGRTP55899 365 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 STOX1Q6ZVD7 989 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 GMCL1P1Q8NEA9 526 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 GPRC5AQ8NFJ5 357 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 GTF3C2Q8WUA4 911 aaPredicted RBP20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 MORF4L1Q9UBU8 362 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 SYNPO2Q9UMS6 1093 aa20.58■□□□□ 0.89
CHRDL2-206ENST00000528789 E7EWF7 191 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 DSG3P32926 999 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 NOVP48745 357 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 ARHGEF6Q15052 776 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 Q3C1V9 767 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 ATG4CQ96DT6 458 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 TMEM47Q9BQJ4 181 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 HOXC10Q9NYD6 342 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 BTBD7Q9P203 1132 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
CHRDL2-206ENST00000528789 SLC27A2O14975 620 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 TOP1P11387 765 aaKnown RBP20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 MCCP23508 829 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 ERVK-9P63128 1117 aa20.56■□□□□ 0.88
CHRDL2-206ENST00000528789 ERVK-24P63145 666 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms