RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 ZBTB10Q96DT7 871 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 BICD1Q96G01 975 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 RTFDC1Q9BY42 306 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 PPP1R12CQ9BZL4 782 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 CHMP3Q9Y3E7 222 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 KIF3AQ9Y496 699 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 TSPAN6O43657 245 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 HNRNPCP07910 306 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 HSP90AB1P08238 724 aaKnown RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 CYP11B2P19099 503 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 TRAF1Q13077 416 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 KIF4BQ2VIQ3 1234 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 FILIP1LQ4L180 1135 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 CCDC129Q6ZRS4 1044 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 KIAA1211Q6ZU35 1233 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 METTL3Q86U44 580 aaKnown RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 DRAXINQ8NBI3 349 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 HVCN1Q96D96 273 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 LRRC4BQ9NT99 713 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 C6orf203Q9P0P8 240 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 SPATA7Q9P0W8 599 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 TRPC6Q9Y210 931 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 DOCK2Q92608 1830 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 POTECB2RU33 542 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 RASA4BC9J798 803 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 SCAMP3O14828 347 aaKnown RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 MTRF1O75570 445 aaKnown RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 CDKL5O76039 1030 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 HARSP12081 509 aaKnown RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 RAC2P15153 192 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 SESN3P58005 492 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 LAPTM5Q13571 262 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 C10orf76Q5T2E6 689 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 TSHZ3Q63HK5 1081 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 SLC7A5P1Q8MH63 180 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 SLAIN1Q8ND83 568 aa4.3□□□□□ -1.72
PTPN22-207ENST00000528414 C9orf78Q9NZ63 289 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-207ENST00000528414 E2F6O75461 281 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 FGFR1OPO95684 399 aaKnown RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 EPB42P16452 691 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 MASP1P48740 699 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 HYIQ5T013 277 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 FERMT3Q86UX7 667 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 JAMLQ86YT9 394 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 ANKRD49Q8WVL7 239 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 TRMT2BQ96GJ1 504 aaKnown RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 FAXDC2Q96IV6 333 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 CDK5RAP3Q96JB5 506 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 CAPS2Q9BXY5 557 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 LMCD1Q9NZU5 365 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 B3GALNT1O75752 331 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 FMNL1O95466 1100 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 XRCC5P13010 732 aaKnown RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 IDEP14735 1019 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 ITGAEP38570 1179 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 CASP2P42575 452 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 GJA8P48165 433 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 ROR1Q01973 937 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 GRAMD1BQ3KR37 738 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 WWC2Q6AWC2 1192 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 GALNT17Q6IS24 598 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 RASSF3Q86WH2 238 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 LDHDQ86WU2 507 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 RPAP2Q8IXW5 612 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 JPH3Q8WXH2 748 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 IRX2Q9BZI1 471 aaPredicted RBP4.29□□□□□ -1.72
PTPN22-207ENST00000528414 TRIM7Q9C029 511 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 TSPY26PQ9H489 355 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 CAPN10Q9HC96 672 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 DIAPH3Q9NSV4 1193 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 KCTD5Q9NXV2 234 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 CFAP45Q9UL16 551 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 IPPQ9Y573 584 aa4.29□□□□□ -1.72
PTPN22-207ENST00000528414 GLTPD2A6NH11 291 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 RASA4O43374 803 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 DNAJA1P31689 397 aaKnown RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 NOS2P35228 1153 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 IRX1P78414 480 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PLEKHG4Q58EX7 1191 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 LARP1Q6PKG0 1096 aaKnown RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 SPICE1Q8N0Z3 855 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 OR8H2Q8N162 312 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 NLRP7Q8WX94 980 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 TBC1D5Q92609 795 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 SKA1Q96BD8 255 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 FRMD6Q96NE9 622 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ZNF700Q9H0M5 742 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ZNF304Q9HCX3 659 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PIH1D1Q9NWS0 290 aaKnown RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 PCSK1NQ9UHG2 260 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 RSPH14Q9UHP6 348 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ATP1B4Q9UN42 357 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 NOSIPQ9Y314 301 aaKnown RBP4.28□□□□□ -1.72
PTPN22-207ENST00000528414 ERBB4Q15303 1308 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 TMCO5BA8MYB1 307 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 STT3AP46977 705 aa4.28□□□□□ -1.72
PTPN22-207ENST00000528414 FKBP1BP68106 108 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms