RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SLC44A5Q8NCS7 719 aa28.55■■■□□ 2.16
CPSF1-202ENST00000527827 DNAJC2Q99543 621 aaKnown RBP28.55■■■□□ 2.16
CPSF1-202ENST00000527827 MOV10L1Q9BXT6 1211 aaKnown RBP28.55■■■□□ 2.16
CPSF1-202ENST00000527827 MSCO60682 206 aa28.54■■■□□ 2.16
CPSF1-202ENST00000527827 CNGA1P29973 690 aa28.54■■■□□ 2.16
CPSF1-202ENST00000527827 MDM2Q00987 491 aaPredicted RBP28.54■■■□□ 2.16
CPSF1-202ENST00000527827 KIAA1755Q5JYT7 1200 aa28.54■■■□□ 2.16
CPSF1-202ENST00000527827 CLASRPQ8N2M8 674 aaKnown RBP28.54■■■□□ 2.16
CPSF1-202ENST00000527827 LPAR1Q92633 364 aa28.54■■■□□ 2.16
CPSF1-202ENST00000527827 HOXC10Q9NYD6 342 aa28.54■■■□□ 2.16
CPSF1-202ENST00000527827 APBB1O00213 710 aa28.53■■■□□ 2.16
CPSF1-202ENST00000527827 CYBAP13498 195 aa28.53■■■□□ 2.16
CPSF1-202ENST00000527827 KIF1BPQ96EK5 621 aa28.53■■■□□ 2.16
CPSF1-202ENST00000527827 BAZ2AQ9UIF9 1905 aaKnown RBP28.53■■■□□ 2.16
CPSF1-202ENST00000527827 SIAH1Q8IUQ4 282 aa28.52■■■□□ 2.16
CPSF1-202ENST00000527827 DYNLL2Q96FJ2 89 aa28.52■■■□□ 2.16
CPSF1-202ENST00000527827 TANGO6Q9C0B7 1094 aa28.52■■■□□ 2.16
CPSF1-202ENST00000527827 SPATC1LQ9H0A9 340 aa28.52■■■□□ 2.16
CPSF1-202ENST00000527827 PARP14Q460N5 1801 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 ADORA2AP29274 412 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 TMEM179Q6ZVK1 233 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 DPP9Q86TI2 863 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 SIRT2Q8IXJ6 389 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 MIER1Q8N108 512 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 SHCBP1Q8NEM2 672 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 ARMT1Q9H993 441 aa28.51■■■□□ 2.15
CPSF1-202ENST00000527827 DNM1LO00429 736 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 DLL1O00548 723 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 STRNO43815 780 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 IFIT2P09913 472 aaKnown RBP28.5■■■□□ 2.15
CPSF1-202ENST00000527827 SLFNL1Q499Z3 407 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 OLFML2BQ68BL8 750 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 CLEC10AQ8IUN9 316 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 RPAP2Q8IXW5 612 aaPredicted RBP28.5■■■□□ 2.15
CPSF1-202ENST00000527827 MTMR10Q9NXD2 777 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 SWAP70Q9UH65 585 aa28.5■■■□□ 2.15
CPSF1-202ENST00000527827 PRKAB2O43741 272 aa28.49■■■□□ 2.15
CPSF1-202ENST00000527827 ERCC3P19447 782 aa28.49■■■□□ 2.15
CPSF1-202ENST00000527827 DSG3P32926 999 aa28.49■■■□□ 2.15
CPSF1-202ENST00000527827 ATN1P54259 1190 aaPredicted RBP28.49■■■□□ 2.15
CPSF1-202ENST00000527827 COBLO75128 1261 aa28.48■■■□□ 2.15
CPSF1-202ENST00000527827 AKR1B1P15121 316 aa28.48■■■□□ 2.15
CPSF1-202ENST00000527827 STXBP5LQ9Y2K9 1186 aa28.48■■■□□ 2.15
CPSF1-202ENST00000527827 TMX2Q9Y320 296 aa28.48■■■□□ 2.15
CPSF1-202ENST00000527827 ZNFX1Q9P2E3 1918 aaKnown RBP28.47■■■□□ 2.15
CPSF1-202ENST00000527827 ZBED9Q6R2W3 1325 aa28.47■■■□□ 2.15
CPSF1-202ENST00000527827 SMIM22K7EJ46 135 aa28.47■■■□□ 2.15
CPSF1-202ENST00000527827 ADD2P35612 726 aa28.47■■■□□ 2.15
CPSF1-202ENST00000527827 MB21D1Q8N884 522 aa28.47■■■□□ 2.15
CPSF1-202ENST00000527827 PAG1Q9NWQ8 432 aa28.47■■■□□ 2.15
CPSF1-202ENST00000527827 LTBP2Q14767 1821 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 MYH7P12883 1935 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 HMMRO75330 724 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 MBD4O95243 580 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 GJC2Q5T442 439 aaPredicted RBP28.46■■■□□ 2.15
CPSF1-202ENST00000527827 SPICE1Q8N0Z3 855 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 ATG4CQ96DT6 458 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 BCL11AQ9H165 835 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 BOLA2Q9H3K6 86 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 ATP8A2Q9NTI2 1148 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 ZBTB40Q9NUA8 1239 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 A0A0C4DFX4 3053 aa28.46■■■□□ 2.15
CPSF1-202ENST00000527827 FLOT1O75955 427 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 MS4A1P11836 297 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 RTP1P59025 263 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 ICA1Q05084 483 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 MROH8Q9H579 483 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 VCPKMTQ9H867 229 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 ARHGEF10LQ9HCE6 1279 aa28.45■■■□□ 2.14
CPSF1-202ENST00000527827 COL11A1P12107 1806 aaPredicted RBP28.45■■■□□ 2.14
CPSF1-202ENST00000527827 CYP2D7A0A087X1C5 515 aa28.44■■■□□ 2.14
CPSF1-202ENST00000527827 RAB11FIP3O75154 756 aa28.44■■■□□ 2.14
CPSF1-202ENST00000527827 PLS1Q14651 629 aa28.44■■■□□ 2.14
CPSF1-202ENST00000527827 C12orf60Q5U649 245 aa28.44■■■□□ 2.14
CPSF1-202ENST00000527827 ANO1Q5XXA6 986 aa28.44■■■□□ 2.14
CPSF1-202ENST00000527827 ARRDC4Q8NCT1 418 aa28.44■■■□□ 2.14
CPSF1-202ENST00000527827 SEPT4O43236 478 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 CHGBP05060 677 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 ATP5JP18859 108 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 CDK8P49336 464 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 NCAPG2Q86XI2 1143 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 ABRAQ8N0Z2 381 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 CCDC17Q96LX7 622 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 LBHD1Q9BQE6 289 aaPredicted RBP28.43■■■□□ 2.14
CPSF1-202ENST00000527827 DDX19BQ9UMR2 479 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 COG6Q9Y2V7 657 aa28.43■■■□□ 2.14
CPSF1-202ENST00000527827 PRAMEF19Q5SWL8 479 aa28.42■■■□□ 2.14
CPSF1-202ENST00000527827 HAUS7Q99871 368 aa28.42■■■□□ 2.14
CPSF1-202ENST00000527827 SH2D4AQ9H788 454 aa28.42■■■□□ 2.14
CPSF1-202ENST00000527827 SMCHD1A6NHR9 2005 aa28.42■■■□□ 2.14
CPSF1-202ENST00000527827 USP17L12C9JPN9 530 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 USP17L21D6R901 530 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 WDR46O15213 610 aaKnown RBP28.41■■■□□ 2.14
CPSF1-202ENST00000527827 TMEM132BQ14DG7 1078 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 C16orf86Q6ZW13 317 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 MAML3Q96JK9 1138 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 SLC5A4Q9NY91 659 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 ATP11BQ9Y2G3 1177 aa28.41■■■□□ 2.14
CPSF1-202ENST00000527827 POTEB2H3BUK9 544 aa28.4■■■□□ 2.14
CPSF1-202ENST00000527827 SAMD1Q6SPF0 538 aaPredicted RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms