RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 UBE3CQ15386 1083 aa26.95■■□□□ 1.9
TRAPPC4-208ENST00000527680 ARHGEF10LQ9HCE6 1279 aa26.95■■□□□ 1.9
TRAPPC4-208ENST00000527680 SLC4A4Q9Y6R1 1079 aa26.95■■□□□ 1.9
TRAPPC4-208ENST00000527680 USP17L12C9JPN9 530 aa26.94■■□□□ 1.9
TRAPPC4-208ENST00000527680 USP17L21D6R901 530 aa26.94■■□□□ 1.9
TRAPPC4-208ENST00000527680 SAMD1Q6SPF0 538 aaPredicted RBP26.94■■□□□ 1.9
TRAPPC4-208ENST00000527680 CYP2D7A0A087X1C5 515 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 CHGBP05060 677 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 AKR1B1P15121 316 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 CNGA1P29973 690 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 CDK8P49336 464 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 MNX1P50219 401 aaPredicted RBP26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 C12orf60Q5U649 245 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 CCDC17Q96LX7 622 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 PRO3102Q9H379 93 aa26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 ZMYND8Q9ULU4 1186 aaPredicted RBP26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 DDX60LQ5H9U9 1706 aaKnown RBP26.93■■□□□ 1.9
TRAPPC4-208ENST00000527680 BAZ2AQ9UIF9 1905 aaKnown RBP26.92■■□□□ 1.9
TRAPPC4-208ENST00000527680 ICA1Q05084 483 aa26.92■■□□□ 1.9
TRAPPC4-208ENST00000527680 PLS1Q14651 629 aa26.92■■□□□ 1.9
TRAPPC4-208ENST00000527680 DPP9Q86TI2 863 aa26.92■■□□□ 1.9
TRAPPC4-208ENST00000527680 SPICE1Q8N0Z3 855 aa26.92■■□□□ 1.9
TRAPPC4-208ENST00000527680 SH2D4AQ9H788 454 aa26.92■■□□□ 1.9
TRAPPC4-208ENST00000527680 MYH8P13535 1937 aa26.91■■□□□ 1.9
TRAPPC4-208ENST00000527680 LHX8Q68G74 356 aa26.91■■□□□ 1.9
TRAPPC4-208ENST00000527680 LPAR1Q92633 364 aa26.91■■□□□ 1.9
TRAPPC4-208ENST00000527680 FLRT1Q9NZU1 646 aa26.91■■□□□ 1.9
TRAPPC4-208ENST00000527680 FLOT1O75955 427 aa26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 GRB14Q14449 540 aa26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 KIAA1755Q5JYT7 1200 aa26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 CLEC10AQ8IUN9 316 aa26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 MOV10L1Q9BXT6 1211 aaKnown RBP26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 PUS7LQ9H0K6 701 aaKnown RBP26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 ECHDC1Q9NTX5 307 aa26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 ALPK3Q96L96 1907 aa26.9■■□□□ 1.9
TRAPPC4-208ENST00000527680 SMIM22K7EJ46 135 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 STRNO43815 780 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 SYN1P17600 705 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 SIAH1Q8IUQ4 282 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 NPLOC4Q8TAT6 608 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 GPATCH3Q96I76 525 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 SPATC1LQ9H0A9 340 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 TMX2Q9Y320 296 aa26.89■■□□□ 1.9
TRAPPC4-208ENST00000527680 A0A1W2PPC1 479 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 RAD21O60216 631 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 DSG3P32926 999 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 CTR9Q6PD62 1173 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 C16orf86Q6ZW13 317 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 MB21D1Q8N884 522 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 VCPKMTQ9H867 229 aa26.88■■□□□ 1.89
TRAPPC4-208ENST00000527680 HOXC6P09630 235 aa26.87■■□□□ 1.89
TRAPPC4-208ENST00000527680 ERCC3P19447 782 aa26.87■■□□□ 1.89
TRAPPC4-208ENST00000527680 CYP2C19P33261 490 aa26.87■■□□□ 1.89
TRAPPC4-208ENST00000527680 NCAPG2Q86XI2 1143 aa26.87■■□□□ 1.89
TRAPPC4-208ENST00000527680 MYH7P12883 1935 aa26.86■■□□□ 1.89
TRAPPC4-208ENST00000527680 EEF2P13639 858 aaKnown RBP26.86■■□□□ 1.89
TRAPPC4-208ENST00000527680 ADORA2AP29274 412 aa26.86■■□□□ 1.89
TRAPPC4-208ENST00000527680 KANSL2Q9H9L4 492 aa26.86■■□□□ 1.89
TRAPPC4-208ENST00000527680 SLC5A4Q9NY91 659 aa26.86■■□□□ 1.89
TRAPPC4-208ENST00000527680 PFASO15067 1338 aa26.86■■□□□ 1.89
TRAPPC4-208ENST00000527680 STK11IPQ8N1F8 1099 aa26.85■■□□□ 1.89
TRAPPC4-208ENST00000527680 SHCBP1Q8NEM2 672 aa26.85■■□□□ 1.89
TRAPPC4-208ENST00000527680 ATG4CQ96DT6 458 aa26.85■■□□□ 1.89
TRAPPC4-208ENST00000527680 MROH8Q9H579 483 aa26.85■■□□□ 1.89
TRAPPC4-208ENST00000527680 DCTPP1Q9H773 170 aa26.85■■□□□ 1.89
TRAPPC4-208ENST00000527680 DDX20Q9UHI6 824 aaKnown RBP26.85■■□□□ 1.89
TRAPPC4-208ENST00000527680 WDR46O15213 610 aaKnown RBP26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 MSCO60682 206 aa26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 STRBPQ96SI9 672 aaKnown RBP26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 GDF15Q99988 308 aa26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 SENP6Q9GZR1 1112 aaPredicted RBP26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 MKNK2Q9HBH9 465 aa26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 ARPP21Q9UBL0 812 aaPredicted RBP26.84■■□□□ 1.89
TRAPPC4-208ENST00000527680 MINDY4BA8MYZ0 360 aa26.83■■□□□ 1.89
TRAPPC4-208ENST00000527680 COL6A1P12109 1028 aa26.83■■□□□ 1.89
TRAPPC4-208ENST00000527680 KBTBD3Q8NAB2 608 aa26.83■■□□□ 1.89
TRAPPC4-208ENST00000527680 GOPCQ9HD26 462 aa26.83■■□□□ 1.89
TRAPPC4-208ENST00000527680 RANBP2P49792 3224 aaKnown RBP26.83■■□□□ 1.89
TRAPPC4-208ENST00000527680 BMP8BP34820 402 aa26.82■■□□□ 1.88
TRAPPC4-208ENST00000527680 TSHZ3Q63HK5 1081 aa26.82■■□□□ 1.88
TRAPPC4-208ENST00000527680 APPP05067 770 aa26.81■■□□□ 1.88
TRAPPC4-208ENST00000527680 MAGEA10P43363 369 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC4-208ENST00000527680 LRRC26Q2I0M4 334 aa26.81■■□□□ 1.88
TRAPPC4-208ENST00000527680 RNF113AO15541 343 aaKnown RBP26.8■■□□□ 1.88
TRAPPC4-208ENST00000527680 COBLO75128 1261 aa26.8■■□□□ 1.88
TRAPPC4-208ENST00000527680 FCER1AP12319 257 aa26.8■■□□□ 1.88
TRAPPC4-208ENST00000527680 OLFML2BQ68BL8 750 aa26.8■■□□□ 1.88
TRAPPC4-208ENST00000527680 TRPV1Q8NER1 839 aa26.8■■□□□ 1.88
TRAPPC4-208ENST00000527680 APPBP2Q92624 585 aa26.8■■□□□ 1.88
TRAPPC4-208ENST00000527680 RLFQ13129 1914 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 GSG1L2A8MUP6 293 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 SLC25A27O95847 323 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 MYCNP04198 464 aaPredicted RBP26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 TMEM132BQ14DG7 1078 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 SBK1Q52WX2 424 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 OSBP2Q969R2 916 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 UBE2OQ9C0C9 1292 aaKnown RBP26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 FBXO28Q9NVF7 368 aa26.79■■□□□ 1.88
TRAPPC4-208ENST00000527680 SOX1O00570 391 aaPredicted RBP26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 ZFYP08048 801 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms