RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 POTEEQ6S8J3 1075 aa31.39■■■□□ 2.62
TSPAN4-217ENST00000527644 LBX2Q6XYB7 198 aa31.39■■■□□ 2.62
TSPAN4-217ENST00000527644 CENPFP49454 3210 aa31.39■■■□□ 2.62
TSPAN4-217ENST00000527644 PRDM1O75626 825 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 PDE4AP27815 886 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 IRF5Q13568 498 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 ALX1Q15699 326 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 Q3C1V9 767 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 KIAA1755Q5JYT7 1200 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 SLAIN1Q8ND83 568 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 PAGR1Q9BTK6 254 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 HOXC10Q9NYD6 342 aa31.38■■■□□ 2.61
TSPAN4-217ENST00000527644 PEX10O60683 326 aa31.37■■■□□ 2.61
TSPAN4-217ENST00000527644 COG2Q14746 738 aa31.37■■■□□ 2.61
TSPAN4-217ENST00000527644 TMEM106CQ9BVX2 250 aa31.37■■■□□ 2.61
TSPAN4-217ENST00000527644 TANGO6Q9C0B7 1094 aa31.37■■■□□ 2.61
TSPAN4-217ENST00000527644 GREB1LQ9C091 1923 aaPredicted RBP31.36■■■□□ 2.61
TSPAN4-217ENST00000527644 NYAP2Q9P242 653 aa31.36■■■□□ 2.61
TSPAN4-217ENST00000527644 DOCK3Q8IZD9 2030 aa31.36■■■□□ 2.61
TSPAN4-217ENST00000527644 CCDC171Q6TFL3 1326 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 SPDYE16A6NNV3 312 aaPredicted RBP31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 HIP1O00291 1037 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 WDR46O15213 610 aaKnown RBP31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 ADCY3O60266 1144 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 MAPK4P31152 587 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 MFAP1P55081 439 aaKnown RBP31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 ZNF589Q86UQ0 364 aaPredicted RBP31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 SPICE1Q8N0Z3 855 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 PXYLP1Q8TE99 480 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 GOPCQ9HD26 462 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 ANAPC4Q9UJX5 808 aa31.35■■■□□ 2.61
TSPAN4-217ENST00000527644 IGKV6D-41A0A0C4DH26 115 aa31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 CNMDO75829 334 aa31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 HSPD1P10809 573 aaKnown RBP31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 CCNA1P78396 465 aa31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 CCAR1Q8IX12 1150 aaKnown RBP31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 GJD2Q9UKL4 321 aa31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 KIAA0100Q14667 2235 aaKnown RBP31.34■■■□□ 2.61
TSPAN4-217ENST00000527644 POTEFA5A3E0 1075 aa31.33■■■□□ 2.61
TSPAN4-217ENST00000527644 DIAPH3Q9NSV4 1193 aa31.33■■■□□ 2.61
TSPAN4-217ENST00000527644 BIN2Q9UBW5 565 aaPredicted RBP31.33■■■□□ 2.61
TSPAN4-217ENST00000527644 FGAP02671 866 aa31.32■■■□□ 2.6
TSPAN4-217ENST00000527644 TSPY3P0CV98 308 aa31.32■■■□□ 2.6
TSPAN4-217ENST00000527644 TSPY8P0CW00 308 aa31.32■■■□□ 2.6
TSPAN4-217ENST00000527644 UBXN2AP68543 259 aa31.32■■■□□ 2.6
TSPAN4-217ENST00000527644 NEDD1Q8NHV4 660 aa31.32■■■□□ 2.6
TSPAN4-217ENST00000527644 PLIN4Q96Q06 1357 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 ZMYM6O95789 1325 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 MYCP01106 439 aaPredicted RBP31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 CTDSPL2Q05D32 466 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 TTC22Q5TAA0 569 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 CWC27Q6UX04 472 aaKnown RBP31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 PORCNQ9H237 461 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 MTMR4Q9NYA4 1195 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 BTBD7Q9P203 1132 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 CLIP2Q9UDT6 1046 aa31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.31■■■□□ 2.6
TSPAN4-217ENST00000527644 FLOT1O75955 427 aa31.3■■■□□ 2.6
TSPAN4-217ENST00000527644 DSG3P32926 999 aa31.3■■■□□ 2.6
TSPAN4-217ENST00000527644 TFAP4Q01664 338 aa31.3■■■□□ 2.6
TSPAN4-217ENST00000527644 MKL1Q969V6 931 aa31.3■■■□□ 2.6
TSPAN4-217ENST00000527644 CEP95Q96GE4 821 aa31.3■■■□□ 2.6
TSPAN4-217ENST00000527644 RBBP6Q7Z6E9 1792 aaKnown RBP31.3■■■□□ 2.6
TSPAN4-217ENST00000527644 RAD21O60216 631 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 ELNP15502 786 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 FAM47AQ5JRC9 791 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 GPR142Q7Z601 462 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 PLEKHH3Q7Z736 793 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 MB21D1Q8N884 522 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 SOCS4Q8WXH5 440 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 NUDT12Q9BQG2 462 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 SYNPO2Q9UMS6 1093 aa31.29■■■□□ 2.6
TSPAN4-217ENST00000527644 TTLL1O95922 423 aa31.28■■■□□ 2.6
TSPAN4-217ENST00000527644 MTFR1Q15390 333 aa31.28■■■□□ 2.6
TSPAN4-217ENST00000527644 F5H6K3 240 aa31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 FGRP09769 529 aa31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 GSPT1P15170 499 aaKnown RBP31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 KLRC3Q07444 240 aa31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 PPP4R3BQ5MIZ7 849 aa31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 CWC22Q9HCG8 908 aaKnown RBP31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 RLFQ13129 1914 aa31.27■■■□□ 2.6
TSPAN4-217ENST00000527644 ORC4O43929 436 aa31.26■■■□□ 2.59
TSPAN4-217ENST00000527644 EN2P19622 333 aaPredicted RBP31.26■■■□□ 2.59
TSPAN4-217ENST00000527644 INCENPQ9NQS7 918 aa31.26■■■□□ 2.59
TSPAN4-217ENST00000527644 TSPY2A6NKD2 308 aa31.25■■■□□ 2.59
TSPAN4-217ENST00000527644 INHAP05111 366 aa31.25■■■□□ 2.59
TSPAN4-217ENST00000527644 CCL5P13501 91 aa31.25■■■□□ 2.59
TSPAN4-217ENST00000527644 FAM83BQ5T0W9 1011 aa31.25■■■□□ 2.59
TSPAN4-217ENST00000527644 ATG4CQ96DT6 458 aa31.25■■■□□ 2.59
TSPAN4-217ENST00000527644 TACC3Q9Y6A5 838 aa31.25■■■□□ 2.59
TSPAN4-217ENST00000527644 PLXNB2O15031 1838 aa31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 NDUFB10O96000 172 aa31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 XRCC5P13010 732 aaKnown RBP31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 MORN1Q5T089 497 aa31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 USP6NLQ92738 828 aa31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 SPATC1LQ9H0A9 340 aa31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 ADAMTS5Q9UNA0 930 aa31.24■■■□□ 2.59
TSPAN4-217ENST00000527644 RANBP6O60518 1105 aaKnown RBP31.23■■■□□ 2.59
TSPAN4-217ENST00000527644 CYP2B6P20813 491 aa31.23■■■□□ 2.59
TSPAN4-217ENST00000527644 WDR78Q5VTH9 848 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms