RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 CALM2P0DP24 149 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 CALM3P0DP25 149 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 VEGFAP15692 232 aaPredicted RBP10.68□□□□□ -0.7
CDC27-204ENST00000527547 PDCP20941 246 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 RCAN1P53805 252 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 ALG1Q9BT22 464 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 ADARB2Q9NS39 739 aaKnown RBP10.68□□□□□ -0.7
CDC27-204ENST00000527547 GREB1LQ9C091 1923 aaPredicted RBP10.68□□□□□ -0.7
CDC27-204ENST00000527547 BAZ2BQ9UIF8 2168 aaKnown RBP10.68□□□□□ -0.7
CDC27-204ENST00000527547 CCDC196A0A1B0GTZ2 297 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 NT5C2P49902 561 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 GRM4Q14833 912 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 C8orf76Q96K31 380 aa10.68□□□□□ -0.7
CDC27-204ENST00000527547 V9GY48 417 aaPredicted RBP10.68□□□□□ -0.7
CDC27-204ENST00000527547 MCM4P33991 863 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 ICA1Q05084 483 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 TMEM179Q6ZVK1 233 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 SHISA4Q96DD7 197 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 UBA5Q9GZZ9 404 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 GDPD2Q9HCC8 539 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
CDC27-204ENST00000527547 CNTNAP5Q8WYK1 1306 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 A0A1W2PRG0 241 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 GLTPD2A6NH11 291 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 PDHBP11177 359 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 ECE1P42892 770 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 PRKG1Q13976 671 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 KANSL2Q9H9L4 492 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 CABP5Q9NP86 173 aa10.67□□□□□ -0.7
CDC27-204ENST00000527547 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 CYTH3O43739 400 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 TBC1D12O60347 775 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 PKN1Q16512 942 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 TRIM22Q8IYM9 498 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 ACER1Q8TDN7 264 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 GLIS2Q9BZE0 524 aaPredicted RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 ZBTB21Q9ULJ3 1066 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 KCNJ14Q9UNX9 436 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 POLR2AP24928 1970 aaKnown RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 MYH4Q9Y623 1939 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 ADM5C9JUS6 153 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 KLRF2D3W0D1 207 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 PARP1P09874 1014 aaKnown RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 INPP5BP32019 993 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 KIF5BP33176 963 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 CAP2P40123 477 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 DNM1Q05193 864 aaKnown RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 PPP2R5BQ15173 497 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 TTBK2Q6IQ55 1244 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 KCTD1Q719H9 257 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 APOBEC3FQ8IUX4 373 aaKnown RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 FBXO18Q8NFZ0 1043 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 GBP4Q96PP9 640 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
CDC27-204ENST00000527547 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
CDC27-204ENST00000527547 POTECB2RU33 542 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 KIF28PB7ZC32 967 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 EPHX2P34913 555 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 RESTQ13127 1097 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 ZYXQ15942 572 aaKnown RBP10.65□□□□□ -0.7
CDC27-204ENST00000527547 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 EAPPQ56P03 285 aaPredicted RBP10.65□□□□□ -0.7
CDC27-204ENST00000527547 KRT40Q6A162 431 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
CDC27-204ENST00000527547 NUP88Q99567 741 aaPredicted RBP10.65□□□□□ -0.7
CDC27-204ENST00000527547 RNF26Q9BY78 433 aaPredicted RBP10.65□□□□□ -0.7
CDC27-204ENST00000527547 VPS54Q9P1Q0 977 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 NYAP2Q9P242 653 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 STK36Q9NRP7 1315 aa10.65□□□□□ -0.7
CDC27-204ENST00000527547 DEXIO95424 95 aa10.65□□□□□ -0.71
CDC27-204ENST00000527547 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.71
CDC27-204ENST00000527547 SLC16A2P36021 539 aa10.65□□□□□ -0.71
CDC27-204ENST00000527547 AKAP17AQ02040 695 aaKnown RBP10.65□□□□□ -0.71
CDC27-204ENST00000527547 KIAA1755Q5JYT7 1200 aa10.65□□□□□ -0.71
CDC27-204ENST00000527547 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.71
CDC27-204ENST00000527547 SPICE1Q8N0Z3 855 aa10.65□□□□□ -0.71
CDC27-204ENST00000527547 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 PRPF3O43395 683 aaKnown RBP10.64□□□□□ -0.71
CDC27-204ENST00000527547 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 POTEJP0CG39 1038 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
CDC27-204ENST00000527547 ZKSCAN4Q969J2 545 aaPredicted RBP10.64□□□□□ -0.71
CDC27-204ENST00000527547 MAP3K14Q99558 947 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 F5H6K3 240 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 ADAMTS3O15072 1205 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 KLRC3Q07444 240 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 DGKZQ13574 1117 aa10.64□□□□□ -0.71
CDC27-204ENST00000527547 MKL1Q969V6 931 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms