RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 USP17L22D6RA61 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L17D6RBQ6 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L19D6RCP7 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L20D6RJB6 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 USP17L24Q0WX57 530 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 WDR78Q5VTH9 848 aa25.14■■□□□ 1.62
PKP3-205ENST00000527442 EDC3Q96F86 508 aaKnown RBP25.14■■□□□ 1.62
PKP3-205ENST00000527442 NAV1Q8NEY1 1877 aa25.14■■□□□ 1.61
PKP3-205ENST00000527442 RLFQ13129 1914 aa25.14■■□□□ 1.61
PKP3-205ENST00000527442 CYP7A1P22680 504 aa25.13■■□□□ 1.61
PKP3-205ENST00000527442 TATDN1Q6P1N9 297 aa25.13■■□□□ 1.61
PKP3-205ENST00000527442 EVI5LQ96CN4 794 aa25.13■■□□□ 1.61
PKP3-205ENST00000527442 SENP6Q9GZR1 1112 aaPredicted RBP25.13■■□□□ 1.61
PKP3-205ENST00000527442 ZNF236Q9UL36 1845 aa25.13■■□□□ 1.61
PKP3-205ENST00000527442 TRIM6-TRIM34B2RNG4 842 aa25.12■■□□□ 1.61
PKP3-205ENST00000527442 PTPREP23469 700 aa25.12■■□□□ 1.61
PKP3-205ENST00000527442 CCNA1P78396 465 aa25.12■■□□□ 1.61
PKP3-205ENST00000527442 MFSD14CQ5VZR4 134 aa25.12■■□□□ 1.61
PKP3-205ENST00000527442 MIGA1Q8NAN2 632 aa25.12■■□□□ 1.61
PKP3-205ENST00000527442 DNAJC2Q99543 621 aaKnown RBP25.12■■□□□ 1.61
PKP3-205ENST00000527442 PAG1Q9NWQ8 432 aa25.12■■□□□ 1.61
PKP3-205ENST00000527442 SLC15A5A6NIM6 579 aa25.11■■□□□ 1.61
PKP3-205ENST00000527442 VCAM1P19320 739 aa25.11■■□□□ 1.61
PKP3-205ENST00000527442 CATSPERGQ6ZRH7 1159 aa25.11■■□□□ 1.61
PKP3-205ENST00000527442 ACER1Q8TDN7 264 aa25.11■■□□□ 1.61
PKP3-205ENST00000527442 BTBD7Q9P203 1132 aa25.11■■□□□ 1.61
PKP3-205ENST00000527442 DDX20Q9UHI6 824 aaKnown RBP25.11■■□□□ 1.61
PKP3-205ENST00000527442 LAMA2P24043 3122 aaKnown RBP25.11■■□□□ 1.61
PKP3-205ENST00000527442 A0A0G2JMZ2 1700 aa25.11■■□□□ 1.61
PKP3-205ENST00000527442 IGSF3O75054 1194 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 USP5P45974 858 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 RAB3GAP1Q15042 981 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 TICAM2Q86XR7 235 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 NPLOC4Q8TAT6 608 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 GUCD1Q96NT3 240 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 KIAA1683Q9H0B3 1180 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 EHD4Q9H223 541 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 SERPINB13Q9UIV8 391 aa25.1■■□□□ 1.61
PKP3-205ENST00000527442 POTEB2H3BUK9 544 aa25.09■■□□□ 1.61
PKP3-205ENST00000527442 IDH1O75874 414 aaKnown RBP25.09■■□□□ 1.61
PKP3-205ENST00000527442 HOXC6P09630 235 aa25.09■■□□□ 1.61
PKP3-205ENST00000527442 CNGA1P29973 690 aa25.09■■□□□ 1.61
PKP3-205ENST00000527442 ATN1P54259 1190 aaPredicted RBP25.09■■□□□ 1.61
PKP3-205ENST00000527442 GRB14Q14449 540 aa25.09■■□□□ 1.61
PKP3-205ENST00000527442 LBX2Q6XYB7 198 aa25.09■■□□□ 1.61
PKP3-205ENST00000527442 TRPV1Q8NER1 839 aa25.09■■□□□ 1.61
PKP3-205ENST00000527442 SPDYE16A6NNV3 312 aaPredicted RBP25.08■■□□□ 1.61
PKP3-205ENST00000527442 GOLIM4O00461 696 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 CDC45O75419 566 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 CYP2C19P33261 490 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 USP14P54578 494 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 TTF1Q15361 905 aaPredicted RBP25.08■■□□□ 1.61
PKP3-205ENST00000527442 ABCB5Q2M3G0 1257 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 KBTBD3Q8NAB2 608 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 LPAR1Q92633 364 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 RILPL2Q969X0 211 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 LBHD1Q9BQE6 289 aaPredicted RBP25.08■■□□□ 1.61
PKP3-205ENST00000527442 COL25A1Q9BXS0 654 aaPredicted RBP25.08■■□□□ 1.61
PKP3-205ENST00000527442 IVNS1ABPQ9Y6Y0 642 aa25.08■■□□□ 1.61
PKP3-205ENST00000527442 MSCO60682 206 aa25.07■■□□□ 1.6
PKP3-205ENST00000527442 ATP2B2Q01814 1243 aa25.07■■□□□ 1.6
PKP3-205ENST00000527442 CERKLQ49MI3 558 aaPredicted RBP25.07■■□□□ 1.6
PKP3-205ENST00000527442 FAM109BQ6ICB4 259 aaPredicted RBP25.07■■□□□ 1.6
PKP3-205ENST00000527442 MAGEB6Q8N7X4 407 aa25.07■■□□□ 1.6
PKP3-205ENST00000527442 FAM161BQ96MY7 647 aa25.07■■□□□ 1.6
PKP3-205ENST00000527442 RPAP3Q9H6T3 665 aaPredicted RBP25.07■■□□□ 1.6
PKP3-205ENST00000527442 DNM1LO00429 736 aa25.06■■□□□ 1.6
PKP3-205ENST00000527442 IGHA2P01877 340 aa25.06■■□□□ 1.6
PKP3-205ENST00000527442 SHMT1P34896 483 aa25.06■■□□□ 1.6
PKP3-205ENST00000527442 RTP1P59025 263 aa25.06■■□□□ 1.6
PKP3-205ENST00000527442 C8orf34Q49A92 452 aa25.06■■□□□ 1.6
PKP3-205ENST00000527442 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.06■■□□□ 1.62e-8■■■■■ 56.1
PKP3-205ENST00000527442 ANTXR1Q9H6X2 564 aa25.06■■□□□ 1.6
PKP3-205ENST00000527442 CYBAP13498 195 aa25.05■■□□□ 1.6
PKP3-205ENST00000527442 GUCY1A2P33402 732 aa25.05■■□□□ 1.6
PKP3-205ENST00000527442 FSD1Q9BTV5 496 aa25.05■■□□□ 1.6
PKP3-205ENST00000527442 MYH8P13535 1937 aa25.04■■□□□ 1.6
PKP3-205ENST00000527442 TTC6Q86TZ1 520 aa25.04■■□□□ 1.6
PKP3-205ENST00000527442 CERS3Q8IU89 383 aa25.04■■□□□ 1.6
PKP3-205ENST00000527442 PARP14Q460N5 1801 aa25.04■■□□□ 1.6
PKP3-205ENST00000527442 PLCD1P51178 756 aa25.03■■□□□ 1.6
PKP3-205ENST00000527442 GJC2Q5T442 439 aaPredicted RBP25.03■■□□□ 1.6
PKP3-205ENST00000527442 CABP5Q9NP86 173 aa25.03■■□□□ 1.6
PKP3-205ENST00000527442 HIP1O00291 1037 aa25.02■■□□□ 1.6
PKP3-205ENST00000527442 SEPT2Q15019 361 aa25.02■■□□□ 1.6
PKP3-205ENST00000527442 MOV10L1Q9BXT6 1211 aaKnown RBP25.02■■□□□ 1.6
PKP3-205ENST00000527442 PRKAG2Q9UGJ0 569 aa25.02■■□□□ 1.6
PKP3-205ENST00000527442 ATP11BQ9Y2G3 1177 aa25.02■■□□□ 1.6
PKP3-205ENST00000527442 CHMLP26374 656 aa25.01■■□□□ 1.59
PKP3-205ENST00000527442 EVX2Q03828 476 aa25.01■■□□□ 1.59
PKP3-205ENST00000527442 LRRFIP1Q32MZ4 808 aaKnown RBP25.01■■□□□ 1.59
PKP3-205ENST00000527442 ANO1Q5XXA6 986 aa25.01■■□□□ 1.59
PKP3-205ENST00000527442 RIOK1Q9BRS2 568 aaKnown RBP25.01■■□□□ 1.59
PKP3-205ENST00000527442 A0A1W2PRG0 241 aa25■■□□□ 1.59
PKP3-205ENST00000527442 ADORA2AP29274 412 aa25■■□□□ 1.59
PKP3-205ENST00000527442 ZNF697Q5TEC3 545 aa25■■□□□ 1.59
PKP3-205ENST00000527442 CASC1Q6TDU7 716 aa25■■□□□ 1.59
PKP3-205ENST00000527442 DPP9Q86TI2 863 aa25■■□□□ 1.59
PKP3-205ENST00000527442 DDX24Q9GZR7 859 aaKnown RBP eCLIP25■■□□□ 1.59
PKP3-205ENST00000527442 ZFYP08048 801 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms